RNA id: XM_043264189.1


Basic Information

Item Value
RNA id XM_043264189.1
length 8874
RNA type mRNA
GC content 0.48
exon number 59
gene id LOC122362645
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24590903 ~ 24659950 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACTTCCTTGATTTCACGGGACGGGGAGCGAGTCTCCTCCCACTCGAGTGGCATATTGGTGAGAAAAAAAGCCTCGTTTGTCTCACAGGAAGAAGTTGAAAACATGAAGAAACGCGACAGTTAGAGGAATCGCCACTCAAAAGTCACGGGCTCAGCACGTCTCTTCTCCGGACGACCGGATTACAATGCGTTTCTGTCAAGGCGAAGAAACAAGTGGCTTGAGACGCTGAGTCGACTCTATCAGAGGGGTTAAAGTATCAGAAAAACTACCGAAACGTTTGCAGTCATGTCGGAACACAGGTCCTGTTTCCTTCACATTGGGGATATCGTGTCTCTGTACGCGGAGGGAACTGTCAATGGATTTATCAGCACTTTAGGGTTGGTGGATGACAGATGTGTGGTGCAACCAGAGGCTGGGGATCTTACAAACCCACCGAAAAAATTCAGAGATTGTCTCTTCAAGGTGTGTCCAATGAATAGGTACTCTGCACAGAGACAATTCTGGAAGGCCAAACAGGGGAAACATGGGAACAACACACAGGGAGATCTCTTCAAGAAATTACAGCATGCAGCGGAGCTGGAGCAGAAACAAAATGACACTGAGAACAAGAAATTGTTGGGAGAGGTTGTCAAATATAGTCGGGTTATACAGCTTCTCCATATTAAGAGTAATAAGTACCTGACCGTGAATAAGCGTCTTCCTGCCCTGCTGGAGAAGAACGCCATGCGTGTGTCTCTGGATCCTTCAGGAAACGAGGGCTCCTGGTTCTACATCCAGCCTTTTTGGAAGCTACGCAGCGAAGGAGACAATGTGGTAGTTGGAGATAAAGTGGTTCTAATGCCTGTAAATGCAGGGCAGCCTCTTCACGCCAGCAATATCGAACTTCTGGATAACCGTGGCTGCAAAGAGGTTAACGCTTTGAACTGCAACACTAGTTGGAAGGTCACTCTTTTCATGAAATGCAGTGAATACAGAGATGACGTATTAAAAGGGGGGGATGTGGTGAGGTTGTTTCATGCTGAGCAAGAAAAGTTTCTTACTTGTGATGAGTACAAAAAGCAGCAGTATGTCTTCTTACGAACCACTCTCCGCCAATCAGCAACCTCCGCCACCAGTTCAAAAGCACTATGGGAAGTGGAGGTTGTCCACTATGACCCCTGCAGAGGAGGAGCTGGCCAGTGGAACAGCCTGTTTCGCTTCAAACACCTCGCCACAGGACACTACCTTGCGGCAGAGGTGAATCCTGTTTTCAAAGATCGTACCGACAGTATCACCACCAAAAACGAGACCAACGCAGACACTTTGTACTCTAAAAAGAAGTGGCAGGCTGACAAGATCCCCTACACGCTTGTTGCAGTGCCCCATGGCAATGACATTGCCTCTCTTTTTGAACTGGATGCCACCACCCTACAGCGGGCAGACTGCCTAGTTCCCAGGAACTCGTATGTGAGACTCAGGAACTTGTGCACAAACACTTGGGTGACCAGTACTAATATTCCCATTGATGTTGAGGAGGAACGCCCCGTTATGCTCAAGATCGGCACCTGCCACATGAAGGAGGACAAGGAGGCTTTCTCCATTAATTCTGTCCCCATGTCAGAAGTCAGAGATTTGGACTTTGCCAATGATGCCAACAAGGTCTTGGAGATGTTTGTGCGTATTTTGGGGATCAGCAATTTCCCAGTAGCAAATGAGCGCAGGTTTACCATTAAGCTTTTGGAGGATTTGATCTTCTTTGTATGCGATGTGCCGAACAACGGACAGGACGTGCTGGCTGTAGTCACTTCGAACCCCAACAGAGAGAGGCAGAAACTCATGAGAGAGCAGAACATCCTGGCACAGatcTTTGGAATTCTTAAAGCCCCATTTTCTGAAAGCAAAGAATCATCCATGCCGAAGCTGGAAGATATGGGAGAGCAACGCAACGCTCCATTTAAGTACATGCTACAACTTTGTTACAGAATTCTGCGCCATTCCCAACAAGATTACCGCAAGAATCAGGAGTACATAGCCAAGAATTTTTCCGTCATGCAGGCTCAGATAGGCTATGAGATCCTGGCTGAAGATACAATCACTGCTCTTCTGCACAACAACCGCAAGCTGTTAGAGAAACACATCACTGCACGTGAGATTGAGACCTTTGTCAAACTTCTGCGCAGGAACCGAGAGCCCAGATTTCTGGATTATTTGTCTGACCTGTGTGTCTCCAACAAAACAGCCATTCCTGTCACTCAGGAACTGATTTGCAAATTCATGCTGAACCCCACCAACGCAGACATCCTCATCCAGACCAAACTAATCCCACACACTGAGACCTCTCTGGAGTCATCTTTAATCCAGGAGGATGGTGATGATGAAGAGGTATGGCTATACTGGATTGATAACCACAAAGAGCCTCATGGGAAGTCCATCCGCCACCTGGCTCAGGATGCCAAGGATGGGCAAAAAATGGATGTTGACATCATCACCTACTACAGGTGTCAGCTCAATCTCTTCGCTAAAATGTGCCTGGATCGGCAGTATCTGGCCATCAATCAGATCTCCAATCAGCTGCCAGTAGATCTAATCCTGCGCTGCATGTTTGATGACTGTCTGCCTTACAACCTGCGTGCCTCATTTTGTCGTTTAATGCTGCACATGCATGTGGACCGCGACCCACAGGAGGCCGTGGTACCTGTTCGCTATGCACGACTCTGGACTGAGATACCCTCCAAGATCTCGGTCAATGAATATGACTATGAGTTCAGAGACACTTCCAGAGAGGATATGAAGAGAAAGTTTGCCCCTACTATGCATTTTGTGGATGAATATCTCAAAGATGTGGTCAGTCAGCCTGATCCCTttggagacagagagaaaaatgaaTTGACCCTTGAGGTGGTCCACCTGGCACGTAACCTGGTCTACTTTGGCTTCTACAGCTTTAATGAGCTGCTTTGTCTCACGCGCACCCTGCTGGCCATCCTGGACATTGTCCAACCCACTTCCACATTTATGTTTAAACTCAACAAGAGTCCTGAGGGAGGTAATAATGTCATGCGTACCATCCACGGTGTGGGTGAGATGGTGACTCAGATGGTTCTAAGCAGAGGCTTGATGATGCCCCACTGTCTCCCTGATGCTCAGCCAATCCACGGAAAGCAGATCTGTCTCCCTGACAACGAGAACGTCATGGTGATGGACACCAAGCTCAGGATTATTGAGATTCTGCAGTTTATTCTGAATGTGCGACTTGATTACCGCATCACCTATCTGCTGTCTATCTATAAAAAAGAGTTTGGCGACCAGACTTTGGACACTTCTGCTTCAGTGGCAGAAGTTCCTGTCATGGCTGAGCCAAACATTGAGGAGATTGCGGAGAAAGCAGAGAATATGTTTTCGGGAAGTGCTAAGGAGAGGAGCTCGGTGGACCTTGACGATGAAGGCGGTCAGACATTTCTGCGGGTGCTTATTCACCTCATCATGCAGGACTACCCTCCGCTGGTGTCCGGTTCTCTTCAGCTCATCTTCAAACACTTCAGCCAGAGAGCCGAAGTTCTGCAGGCCTTCAAACAGGTCCAGTTGCTGGTTTCAGAGGAGGATGTTGAGAATTATAAGAAGATCAAGGCAAGTCTGGACCAGCTGCGGCTGACAGTGGAGAAGTCTGAACTCTGGGTCGAGAAGAGTGGAGGTTACGGCAATGAAGACATTGCTGACAATCAAAACAAAGAGCAGAATTTGGAAGAAGCAGGTATCTTGAGCCCAGTGCAGGATGGGAGCAGTAAACCTCAAATAGACAGCAACAAAGCCAACAACTACAAAATTGTCAAAGAGATCCTGCTGAGTCTCAGTAAACTCTGCTCTCCTGGTAAGAAGATTCGTGTGCAGCAGCAGAGGCTGTTAAAGAATATGGGAGCTCACACTGTGGTGCTGGACCTCCTCCAGATCCCGTATGAGAAGGGGGATGAAAAGATGGACGAGATCATGACTCTAGCCCACACGTTCCTTCAGTACTTCTGCAGAGATAATCCTCAGAACCAGACGCTACTGCACAAACACCTCAACCTCTTCCTCACCCCTGGGCTTCTGGAGGCAAAATCTATGTGCTACATCTTCAGGAATAATTACCACCTATGCAACGAGATCAGCGACCGTGTGGTGCATCACTTTGTGCACTGCATCGAGACCCACGGCCGTCACGTGCAGTACTTGCGCTTCCTCCAAACCATTGTAAAAGCCGATGGCAAATACGTGAAGGAATGTCAATGCAAAGTCATGAATGAGCTGGTAAACGGAGGAGAAGACGTGTTGGTTTTCTACAATGATCGTGCTTCTTTCCCGGTACTGCAAAATATGATGTCGTCCCCGCGGGAGGAGAACGATGCTCTAGCATACCACATCACACTGGTGGAGCTGCTGGCAGCCTGCACCGAGGGCAAGAACGTTGATACAGAGCTCAAGTGCAACTCCCTTCTGCCGCTTGATGATATTGTCAAAGTGGTCACGTACGAGGGCTGCATTCCAGAGGTAAAAATTTCATATGTAAATTTCGTGAACCACTGCTATGTAGACACTGAGGTGGAGATGAAGGAGATCTACACCAGCAATCATATTTGGAAACTCTTTGACAATTTCCTTGCAGATATGGAAAAGGTGTCCGTTGGCCCCACAGACAGGAAACAAGCTGATACATGCCTTGAAAAATACGTCACTGATACGATCATGGCCATCGTCAAGGGCTTCTTCGGCTCGCAGTTCTCTGTCAGCAACTCAAACCTGCAGGCCCATCAAGCAACTTTCATTAAGCTGCTGCAGTCCGCCTGCAGACTTTACAACTGCACCTGGCTCAACTCCCTGCAGAAGACTAACATTGAGGGTTGCATCAAAACCCTTGCTGACGTGGCTAAGAGCCGGGCAATCCCCATTCCAGTGGACCTGGACGGTCAGGTCAATACCCTGTCGCTAAAGACACACACCAGCATGGTGCAGCGCGCAGTGAAGGACTGGAAGCTGTCAACCCGCGGCCGACCCCGTAAGGAGCCCTTTGGGGCCCATGATTACAGGATCATTGAGAAACTGCAGGGAGTCGTTGTGTATCTGGAGGAGCAGTTTAGTCCACAGGTGCAAGCAGAGTTTTCTGTATTAGTAGACGTGCTGCAAAGCCCAGAGATGCTGTTTCCTGAGTCTGCACAGCTCCGCAGCGAGGATGGAGCCTTCATGTCTAAGCTCATCAAACACACCAAGAAGCTGATGGAGAAAGAAGAGAAGCTGTGTATTAAGATCTTGCAGACTCTTCGAGAGATGCTGGATAGGAAAGAAATATTCGAGGAAAAGGGTAACACACTGAGAAAAAGTCTCCTCACACACTACTTTGGCAACCAGTGGCCCCACGCCAAAGCACTGGAGTACAGCAGCGGGAACAGCTCTTCCGCTGGAGGTGGTTCTCCAGGACAGGACTCCGATAAGCCAGGCACTAGCGTAATAGACATCCAGTGTGCTCTGGACAACGTCGGAGCGTCCGAGCTGGTCATCGACCTCATCGTCAGCACTAAGAACGACCGTATCTTTGAGGAGAGCATTTTACTGGGCATTGCACTCCTGAGAGGAGGAAATACACAGATTCAGAACTCTTTCCACCATCAGCTGCACAAACAGAAGAAGTCTGAGAAGTTCTTCAAGGTCTTTTATGATCGAATGGAGTTGGCGCAGAAAGAGATCCGCTCCAGTGTGTCAGTCAACATGTTCGAGCTCAGCTGCaggaagagagaggaggagggtgAGGGCTCTGGCATCAGACATAAAAAAGTCCGAGACTCCTTGCACCTCAGAGAAGACAAGGGTCAGCTTAAAGATGCCTCATCAGTCACCTCCAAAGCCTACAGCATCTTTCGACGGGAAGTGGACCCTGAGATGGAGTCGATGGGATCAGGAGTGGACGGGAtggaggaggtggtggaggagacccAGATGAGCCAGGCCATCACCATCATGAAACCCATCCTACGCTTCCTTCAGCTGCTCTGTGAGAACCATAACAGGGACTTGCAGAACTTTCTGCGAGATCAGAACAACAAAACCAATTATAATCTGGTCTGTGAGACGCTGCAGTTTCTTGATTGTATCTGTGGCAGTACGACGGGAGGACTGGGGCTGCTGGGACTCTACATTAATGAGAGGAATGTGGACCTGGTCAAACAGACACTAGAGACCATCACAGAGTACTGCCAGGGTCCTTGCCACGAAAACCAGTCATGCATCGCCAGGCATGAGTCAAACGGCATTGACATCATCATCGCTCTTATTGTGAATCCAATTGATCCACTGGGGAAGAACCGACTTGACCTTGTGCTGGAGTTGAAGAACAATGCATCTGAACTTCTTCTGGCCATCATGGAAAGTCGTCATGACAGCGAAAATGCAGAGAAGATCCTGTATAAGATGAGACCAAATGAACTGATTGACGTGATCAAGGAGGCTTACGTTCAAGGAGAAGAGAGTGAGATTGATCAAGAGACATTAGATCAAATCAGACCTAAAGATGTTGGCCACAACATCTACATCCTGGCCCATCAGCTGGCACGCCACAGAAAAAACCTCCAGCAGAGTTTGAAACCTGGCCCAGATCCTACCATTGAAGGAGAAGCAGCGCTCCTATACTATGCCAACCACACCGCTCAGATAGAGATCGTCCGCCATGACCGTACGATGGAGCAGATTGTGTTTCCCGTGCCTAACATCTGCGAGTACTTAACAGAAGAATCAAAAGTGCGCGTGTTCACTACAACAGAGCGAGACGACCAGGGCAGCAAGGTCAATGACTTCTTCCAGCAGTTTGATGACCTCTACAATGAGATGAGGTggcaaaagaaaataagaaATAATGCACCACTTTTCTGGGTGTCAAAACATATATCTCTGTGGGGTAGTATCTCCTTTAACTTGGCTGTGCTAATCAACTTGGCTGTCGCTCTTTTCTATCCATTTGGAGATGATGGAGATGAAGgtgtcTTGCCACCATTCTTGTCTATTTTGCTGTGGGTAGCAGTGGTCGTAAGCACCTTCACGTTGTTTGTTCTTCCCCCGCGTGGAGGGATCCTGGCGTTCCTGGTCACCGTCATCTTCCGTTCTATTTACACGCTGGGCTTAGGACCCACACTGCTGCTTCTGGGGGCCGCCAACCTGTTGAATAAAATCGTGTTCCTGGTTAGTTTTGTGGGGAACCAGGGCACATTTACACGAGGTTACAAAGCAGTTATCATGGACGTCTTCTTCCTTCTGCATGTCAGTTACGTCATCGTTTGCACGCTGGGTCTGTTCGTACACGAGTTTTTCTACAGTATCCTGTTGTTTGATCTTGTGCGAAGAGAGGAAACGCTCCTAAACGTGATGAGGAGCGTGACGAAGAACGGCCGCTCCATCTTCCTCACAGCTGTTCTGGCTATCATCCTGGTCTACCTCTTCTCCATTGTGGGCTTCCTCTTCTTTAAAGATGACTTCCTCATGGAAGTCGACCGCCTCCCTGCTATAAAGAGGTTGAATGTAAAGGAGTCTATGAACTGCCTAAGTGAAGGCTGTCCTAACTCCCCTTTTAGTTCTCACCACGaagaggatgaagaCGGTacagagcgtgtgtgtgacaCCCTGCTGATGTGCATCATTACTGTTCTGAACCACGGGCTGAGGAACGGAGGAGGAATCGCAGATGTTCTGCGCAAGCTCTCCAAAGAGGAGCCCATGTTCCCGGCACGTGTCGTATATGACCTCTTGTTCTTCTTCATTGTCATCATCATTGTGTTGAACCTCATCTTTGGTGTGATCATTGACACTTTTGCTGACCTGAGGAGTGAGAAACAGAGAAAGGAAGAAATTCTGAAGACCACCTGCTTCATTTGTGGTCTTGAGAGAGACAAGTTTGATAACAAGACAGTGTCGTTTGAGGAGCACATCAAGTCAGAGCACAACATGTGGCACTATTTGTACTTCCTGGTCTTGGTGAAGGTGAAGGACCCCACAGAGTACGGGCCCGAGAGCCACGTGGCCCAAATGATTAAGGAGAAGAATCTGGACTGGTTTCCGCGGATGAGAGCCATGTCTTTGGTAAGCTCCGAGGGAGAAAGCGAACAGAACGAGATCCGATCGCTGCAGGAGAGGCTGGACACCACCGTGGGTCTCGTGGCTCAGCTTTCTTCCCAGCTGTCCGAGCTTAAAGAACAGATGACAGAGCAAAGGAAGAATAAACAGAGACTGGGCTTCCTGGGACCATCACAGATGAACCATCAGATCCCCCCTGCACACTGAGGACGACTCATCGCacctctccacacacacactcacacacagatgcTGATCTTCACACCATGAACAACACTACACTCATGGTGATCTCACACTTTACATCATGACATGACAGTCGTACGGTTACAACCTACAGACTTGAGCACTGGTTGTGTTTGGGGGCTCACATCAGATGACTTTGTCTTTGGAAAGGctatctgattttttttttttttttttttttttttaaagcatcaagTATTAACTCCCTCACATTTTAATTGTCCTGTCCATAACTGGAGTATTGCTGTAATTCAATGTGCACTTTAGTCTGTGCTGGAATACCTGAAGAGATAAAGTGCCTTCAAACaaattaatagtgttttagaATTCAAATTCACAATTTAATGAAAGATATAAGACTTGGAAATTTTATTGTCTCATAATCAGACAATCGTGTCACCAGTCGTGTCACCTTCTACAAAAACGCTAGTCTTAactctttaaataatgattatttttattgtgtattttatgttgGGGACGTGTCTAGCATATTTGTGCTTGCCTTATACAAAAttgtacagaaaataataaagaatttataTTTGGTATTACAA

Function

GO: NA

KEGG:

id description
K04959 ITPR2; inositol 1,4,5-triphosphate receptor type 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190188 lncRNA upstream 65849 24524527 ~ 24525054 (+) True G128863
TU190172 lncRNA upstream 131969 24458719 ~ 24458934 (+) True G128859
TU190169 lncRNA upstream 145704 24444502 ~ 24445199 (+) True G128857
TU190168 lncRNA upstream 147744 24442373 ~ 24443159 (+) True G128856
TU190152 lncRNA upstream 150371 24436038 ~ 24440532 (+) True G128841
TU190464 lncRNA downstream 4501 24664451 ~ 24728979 (+) True G129038
XR_006253143.1 lncRNA downstream 7534 24667484 ~ 24669844 (+) True LOC122362653
XR_006253144.1 lncRNA downstream 75237 24735187 ~ 24737012 (+) True LOC122362654
TU190615 lncRNA downstream 179112 24839062 ~ 24856231 (+) True G129115
TU190628 lncRNA downstream 340780 25000730 ~ 25000930 (+) True G129127
XM_043216669.1 mRNA upstream 2566 24584028 ~ 24588337 (+) False LOC122323037
XM_043216668.1 mRNA upstream 2566 24586945 ~ 24588337 (+) True LOC122323037
XM_043264711.1 mRNA upstream 20682 24550432 ~ 24570221 (+) True eea1
XM_043264712.1 mRNA upstream 20682 24550432 ~ 24570221 (+) False eea1
XM_043264775.1 mRNA upstream 41523 24535296 ~ 24549380 (+) False nudt4a
XM_043264194.1 mRNA downstream 11852 24671802 ~ 24675849 (+) True LOC122362651
XM_043264191.1 mRNA downstream 17710 24677660 ~ 24683938 (+) True LOC122362647
XM_043264190.1 mRNA downstream 79075 24739025 ~ 24741360 (+) True LOC122362646
XM_043264192.1 mRNA downstream 84915 24744865 ~ 24751103 (+) True LOC122362648
XM_043263884.1 mRNA downstream 109446 24769396 ~ 24793099 (+) True lrriq1
TU190455 other upstream 2858 24583845 ~ 24588045 (+) False LOC122323037
TU190171 other upstream 133343 24449765 ~ 24457560 (+) True G128858
TU189952 other upstream 854057 23724636 ~ 23736846 (+) False cdh13
TU189951 other upstream 1011101 23457100 ~ 23579802 (+) False cdh13
TU189495 other upstream 2152224 22434806 ~ 22438679 (+) True G128367
XR_006246977.1 other downstream 335821 24995771 ~ 24995950 (+) True LOC122323238
XR_006253170.1 other downstream 634793 25294743 ~ 25308065 (+) False kiaa0513
XR_006253171.1 other downstream 634793 25294743 ~ 25308065 (+) False kiaa0513
TU190830 other downstream 686455 25346405 ~ 25348594 (+) True mt2
unassigned_transcript_2193 other downstream 1237473 25897423 ~ 25897505 (+) True trnal-cag_32

Expression Profile