RNA id: XM_043264259.1


Basic Information

Item Value
RNA id XM_043264259.1
length 1723
RNA type mRNA
GC content 0.44
exon number 6
gene id wfdc1
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23915929 ~ 23927588 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGTGCTTTTCGTGTCAGTAGACACATTTAACCCTCTCCTCAGAATAACCGATGCATAGACAgctgtctctttttctctttctttttctttgactTCTCTTCCTCAATTTCCCTTTTGTAGGATTCTCTGCAGCTTTTGTTATCTTTATGGCTCTGGAAACTCTCCCTTAGAGGAATTTATGTAACTGCAACAGGACAGAGACACCTTAAGCACATACATGCTGGAGGAAGCCACAACATAAGCACCTTCAACGGGAACAACTTTAAAAGTCTGAGGATTGCTgggagagaagaagaagaacaatcAGGCTGAAAAAGCAGGACCATGCCGGGCTGTCAGATCTGGACTGGGTTTTTGCCGGTTCTGCTGGTCTTTCTGCTGTCTGCATCTGGTTCAGGGAATGCTCGCATGATCAGGAAGAGAGGACTCAACCAGAAGGACTACGAGTACCCCAACCATCCTCAGACGGCTCAGCACCAGAAGAACGACCGCTGTCCTCCTCCGCCGCAGATGCTGCCCGAGCGGGCCTGTGAGGTTCCGGGCTGCCGGTCCGATTCGGAGTGTGAGAGACACAAACGGTGCTGCTACAACGGCTGCATCTACGCCTGCCTGGAGTCAGTGCAACCTCCACCAGTGCTGGACTGGTTGGTGCAGCCCAAGCCGCGGTGGTTAGGAGGCAATGGCTGGCTTTTAGATGGACCAGAAGAAGTTCTGCAGGCTGAGGCCTGTAGTACCACGGAGGATGGAGATGAGCCTTTGCTCTGCCCAACTGGTTATGAGTGCCACATTATCAACCCGGGAAACCCTTCAGCTGGGATCCCAAACCGAGGCCAGTGCATCAAACAGCGTGGAAACTCAGGAAGTAACTCCAACAATGCAGTGAGCTATGAGAAACATCAGCATAAGCATTTGGGCTGAGACAGGTTCGATTCTGGATGAGTGAAGTAACCAGTAACCACTGACCCTTATACCTGAACCACAACCGTTAAATCAAACAGAACTGCACAAGCCTTTCTCTTCAGCTTAAACCATAGATTGGTTCAAATCTGGTGCTCTTTTTCTTAAGTGCTTACGGTGTGACAAAGATGGCGTGACAAAAATGCAAAGTTAAAATTTCCTACCTCTCATGAAAGCCAAAAACAGACGACAGAAAGTATCAAAAAACTTGTACAATAACATGTCTAATACTTTGGGTAAAATGACAATTATCTATATGTGAGTTAAAGGAAACTATTTGGTGTGTGGTTTTTATGCTGCtgagtcagattttttttccccactttaAACATCAAAAACTAACTACTCTCATTTACCGTGCAGCTTTAACTTTTGGTATAGAAATGCTCCATAATCACTTTAATTTCATACCACACAATTATGTTTCTGCTTTagaatttttgttgttgtcgttgttgtttgttttcaaaaaaatcgTGTTTGGGTGCTTCTCTCAGCTAGTTCATTATAGCcaagaaaatgttaaattccTTCTGTGCTCTGTCACTGCAAgctatttgtttttcatatggTGCTCCAATCAATAactttggttgttgttgttgttgttgttgtttactcATGGTGCAGGTTTATGTTTTACTCCACTGCTCTCTGATAAGCTATAGAAATCTGACGAGTGGGATAAACCACAATACAGCTTTCagtgaaacaaaacatttgaaactggTGCTGCATATACTGCCTTGTAAttccaaataaaac

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0030414 peptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189981 lncRNA upstream 128766 23785024 ~ 23787163 (+) True G128725
TU189935 lncRNA upstream 556372 23358451 ~ 23359557 (+) True G128699
TU189930 lncRNA upstream 578840 23335791 ~ 23337089 (+) True G128696
TU189624 lncRNA upstream 835619 23068310 ~ 23080310 (+) True G128476
TU189621 lncRNA upstream 848861 23066812 ~ 23067068 (+) True G128475
TU190019 lncRNA downstream 100901 24028489 ~ 24029817 (+) True G128753
TU190041 lncRNA downstream 129132 24056720 ~ 24063271 (+) True G128770
TU190043 lncRNA downstream 130765 24058353 ~ 24066103 (+) True G128772
TU190086 lncRNA downstream 369521 24297109 ~ 24297333 (+) True G128803
TU190087 lncRNA downstream 370021 24297609 ~ 24297845 (+) True G128804
XM_043264171.1 mRNA upstream 3947 23899926 ~ 23911982 (+) False si:dkey-246g23.4
XM_043264170.1 mRNA upstream 3947 23903651 ~ 23911982 (+) True si:dkey-246g23.4
XM_043264167.1 mRNA upstream 23764 23859036 ~ 23892165 (+) True kcng4a
XM_043264168.1 mRNA upstream 23764 23863436 ~ 23892165 (+) False kcng4a
XM_043264166.1 mRNA upstream 23764 23872264 ~ 23892165 (+) False kcng4a
XM_043216813.1 mRNA downstream 702 23928290 ~ 23936310 (+) True utp4
XM_043265074.1 mRNA downstream 9412 23937000 ~ 23952211 (+) True vps9d1
XM_043265075.1 mRNA downstream 9412 23937000 ~ 23952211 (+) False vps9d1
XM_043263939.1 mRNA downstream 30573 23958161 ~ 23961023 (+) False spata2l
XM_043263938.1 mRNA downstream 30922 23958510 ~ 23961023 (+) True spata2l
TU189952 other upstream 179083 23724636 ~ 23736846 (+) False cdh13
TU189951 other upstream 336127 23457100 ~ 23579802 (+) False cdh13
TU189495 other upstream 1477250 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 1508947 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 3359302 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU190171 other downstream 522177 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 656257 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 1068183 24995771 ~ 24995950 (+) True LOC122323238
XR_006253170.1 other downstream 1367155 25294743 ~ 25308065 (+) False kiaa0513
XR_006253171.1 other downstream 1367155 25294743 ~ 25308065 (+) False kiaa0513

Expression Profile