RNA id: XM_043264422.1


Basic Information

Item Value
RNA id XM_043264422.1
length 2685
RNA type mRNA
GC content 0.48
exon number 10
gene id fkbp4
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20250402 ~ 20256447 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTACCATCTCAGCTCTCGCGCAGCTCTGGAAAGTTCGCTGAGTCGCGTCAGTTTCCACCGGCGGGCCGAACGTTATATAAACGCCTCGCGCATCTCGCCTGCGGACTCGAGAACTACATTTAACAAGCACGAACCGTCAAATTCAAGCCGCGGATCCCGAATCCCATTCCTGATAGCGATATTAATCCCATTTAGCCCTGCAGACGTCGAGTCTCCGGTGATTTCGGCAAAGGAGAGACCTCGGACAGATACTCCGTGAGGTCTAATTTTGGGCTGTTTCgaaggaaataataatattaaatcaaagaTGACTGCAGAAGAGGTGGTGAGTGAAGGCTGTAGCATCCCCGTCGAGGGTGAAGACATCACCCCGAAGAAAGATGGAGgtgttttaaagATGGTCAAGAAGGAGGGTACAGGCACGGAGCTGCCTATGACCGGCGATAAAGTATTCGTACACTATGTTGGAACGCTGCTTGATGGCACGCAGTTTGACTCCAGCCGTGATCGAGGAGAGAAGTTCTCCTTTGAGCTGGGCAAAGGTCAGGTGATCAAAGCGTGGGACATCGGTGTAGCCACGATGAAGGTTGGCGAGATCTGCCAGTTGATTTGCAAGCCCGAGTATGCCTATGGAGCTGCTGGCAGCCCGCCCAAAATCCCACCCAACGCTACACTTGTGTTCCAGGTGGAGTTGTTTGAGTTTCACGGGGAGGACATCACAGATGAAGAAGACGGCGGTATTATTCGCAGGATCATCACTAAGGGGGAGGGTTACACAAAGCCTAATGAGAGTGCATCTGTGGAAGTGTGGCTGGAGGGCAGTCACGAGGAGCGCGTTTTCGATGAGCGTGAGCTGAAGTTTGAGGTGGGAGAAGGAGAGAGTTTGGGTCTGCCTCCAGGTGTGGAGAAAGCCCTGCAGTCTATGGAGCAGGGGGAAGAGGCGCTCTTCACCATCAAACCAAAGTATGGCTTTGGAACTGCTGGCAGCGACAAATTCAACATTCCACCTAATGCTACGTTGCAGTATAAAATCAAACTGAAAGCATTCGAGAAGGCCAAAGAATCCTGGGAGATGAACACGGTTGAGAAACTAGAACAGAGCGCCATCGACAAAGAGAAAGGAACTCAGTATTTTAAGGAGGGGAAATACAAGCAGGCATCCATGCAGTACAAACGCATTGTGTCCTGGTTGGAGCACGAGTCCAGCCTGCAGCCAGAGGACGAAGAGAAAGCCAAAGCACTGCGATTGGCTGCTCATCTTAACCTAGCTATGTGCTACCTAAAGCTGCAGGAGCCTAACCCTGCCGTTGAGAACTGCGACAAGGCACTGGAGCTGGACGCGAATAACGAGAAGGCCTTGTTTCGACGAGGAGAGGCACTGGTCGGCATGAAGGAGTTCGACAGGGCGAGAGCAGACTTCCAGCGCGTCTCTCAATTGTATCCAGCCAATAAAGCCGCGAAGAGCCAGATCGTGCTCTGCCAGAAACATATCAAAGAGCAACACGAGAAGGACAAGCGCCTCTATGCCAACATGTTTCAGAAGTTTGCGGAGCGAGATGCCAAAGAAGCGGAGcaagaaaaggaggaaaagaaACCGAATGGTAGTGCAATGGAAATAGATGAAAACGGAGCCCAGGAACAAACTGCAGCATAATAGCATGCTTGCGTGCGCgtttgtattatttactgtcttttgtgttatgtttttttttaaggttttttttttttttttttttgtaccgtCTGTAATATCTGTCCCTCTGAAGCGACTGTTCGTGTGAATGAGGACGCGTACTTGCTTTGGTTTCTAATCTAATGTAGCAAGTGGTTTGCTTTTGTACTGTGGCCAGGTGCGCGCTCGCGTGAGATTGCACAAGTGTATGAATGTCTGTGCGTGCGATACTGTAAGGCAGCTAGTCGACCGGGCCGCGTTCTCTCTTAGAGATGGTGGAAATAATGCGGACCTGTCCTCGGTCTGTCGCCTGTAGTGCAGCCTCTCTCGCCGGCTGCCGAACCATCGCCGATCCTTAGAAACTCTCGAGTCGCACTGCTGTACAATAAAGCGCTTTTCTGTCCTGCCACTAAACTTTACGTGAAGTGCATGGAAATGAATGCCAGGGCAAAAAAGactgttttgatttgttcattCGCTTTATTAAGAACATCTTTTCACTGTTAAATTCTTTGTGTATCACAACTGGAAGCATTTCCGTAGCGAGTCTCTGCTGAAGTCTTACAAGCGTTTTAGAGGAGAAACCACGCACTTTTCCTGTGAAGAATCGTCTAGTCTCTGCTTCACTTGTTTTCTGTGTGCAGCCTTTTTGTTCAGATTGTTCCATCGCAGAATATCATCAATACAGGGCTGAGATGTTGGCCGTTTTAATATACAAGGCTAGAACTTGAACTTAGACCTACAGTCtgtcgtctttttttttttcggttttgTCCCgtcttttcatctttttgtgGACAAAGTACCCCATGATTTCTCCATAATCGCAATTGCGCGCTGTAATCGAATGGTGACTTGTTACTGCAGAAGAGGCTCTGTGTGACGGAGCTCAAGCAGGACAGTAGTACTGTAGTGTGCTTTGTGTGGGTTAAAGCGAGACATACAGATTCTGTTCCCATGTCCTTCATGCGCCTCTGATGTCGACTagaacaattaaacaaattcaGAATCC

Function

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006253191.1 lncRNA upstream 25818 20221304 ~ 20224584 (+) True LOC122363139
TU188681 lncRNA upstream 35171 20202748 ~ 20215231 (+) False G127766
TU188679 lncRNA upstream 38985 20202748 ~ 20211417 (+) True G127766
TU188509 lncRNA upstream 258766 19985741 ~ 19991636 (+) True G127663
TU188470 lncRNA upstream 325600 19781765 ~ 19924802 (+) True G127637
TU188698 lncRNA downstream 265 20256712 ~ 20281295 (+) True G127780
TU188708 lncRNA downstream 68883 20325330 ~ 20383758 (+) True G127785
TU188734 lncRNA downstream 117407 20373854 ~ 20375835 (+) True G127800
TU188810 lncRNA downstream 305636 20562083 ~ 20572310 (+) True G127860
TU188825 lncRNA downstream 329604 20586051 ~ 20588863 (+) True G127873
XM_043264419.1 mRNA upstream 11601 20230154 ~ 20238801 (+) True wash1
XM_043263955.1 mRNA upstream 52587 20160121 ~ 20197815 (+) True ptprq
XM_043263956.1 mRNA upstream 90224 20155466 ~ 20160178 (+) True LOC122362491
XM_043216815.1 mRNA upstream 95950 20121656 ~ 20154452 (+) True otogl
XM_043216823.1 mRNA upstream 131970 20101629 ~ 20118432 (+) True si:ch1073-390k14.1
XM_043216543.1 mRNA downstream 3322 20259769 ~ 20278496 (+) True b4galnt3b
XM_043264561.1 mRNA downstream 30018 20286465 ~ 20311133 (+) True c2cd5
XM_043264562.1 mRNA downstream 30018 20286465 ~ 20311133 (+) False c2cd5
XM_043264564.1 mRNA downstream 30018 20286465 ~ 20311133 (+) False c2cd5
XM_043264563.1 mRNA downstream 30018 20286465 ~ 20311133 (+) False c2cd5
TU188630 other upstream 162821 20086695 ~ 20087581 (+) False zfhx3a
XR_006246956.1 other upstream 236616 20003004 ~ 20013786 (+) False wdr59
TU188266 other upstream 1408867 18777768 ~ 18841535 (+) False G127500
TU188268 other upstream 1468243 18777768 ~ 18782159 (+) True G127500
TU188208 other upstream 1688792 18560366 ~ 18561610 (+) False G127456
TU188799 other downstream 291380 20547827 ~ 20549318 (+) False glipr1b
XR_006246928.1 other downstream 294701 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU189467 other downstream 2144527 22400974 ~ 22406982 (+) True LOC122363143
TU189495 other downstream 2178359 22434806 ~ 22438679 (+) True G128367
TU189951 other downstream 3200653 23457100 ~ 23579802 (+) False cdh13

Expression Profile