RNA id: XM_043264827.1


Basic Information

Item Value
RNA id XM_043264827.1
length 9004
RNA type mRNA
GC content 0.54
exon number 53
gene id vwf
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20471101 ~ 20504374 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGTTTCTTTTCCTGGTAGCCCGGGTTCCAGTCATGTTTTCGTGACTGAGACACCGAACAGCGAAGACCTTGCATAGCAAAGCGCTTTGGAGAACCTGTCGCTGGGAACCTGCAGCTgggccagaggtcagaggtcagagatggaaCTGTGCAAATGGAAAGGATGGAGCGGAGTCCTCTGGGTTTTCATCTTGAATTTTTCAGGTTCGGTGTCGGTGGAGGGGTCTGGTCGCTGTAGTCTGTTTAGCCGGCAGCATATACACACGTTTGACGGTGTGATTTATGAGTTCCCCGGAGACTGTAGCTACATGCTGGCGGGAGACTGCCAACACAGAAGCTTCTCCATACTGGGTGATTTCTCTCATGGAAGGAGGAAAGGAGTGACTCTGTTTCTGGGAGAATTCTTCGAGCTTCACCTCTCTGTCGATGGGAGGCTGTCACAGGGAGCGGAAAGGCTCCCACTGCCGTACGCGTCGAGTTCTGTGTTTGCAGGGTACGAGCTGGGCTACATTCGATTATGGAGCGACGAGTTCGGGTTCTCCATCCGTATAGACCCCTCACATAACATTCAACTAACGCTCGCCAAGCAGCACAGCAACCGTACCTGCGGCCTGTGTGGAAACTACAATTATTTGGTGGAGGATGAATACACCGCTCAAGAAGgtttTCTGACAGATGATTCGTATGACTTTGCAAACTCCTGGGCCATGAAAGGAGCGGATGAACAGTGCAAACGCGTCTCGCCGCCGTCTCAGAGCTGCAACAGCACCGGAGAATCAGCTAAAGATCAGATGTCACGGTGCGAGGCCATGAGCAGCTCGGCGCTCTACCTGCGCTGTGCTCACCTCGTGGACGCGGCCGTGTTCGTGTCCGTGTGCGAGTCTGACGCCTGTCACTGCGGCGCGCGAGACGAGTGCGTGTGCCAGGCCATGCTGGAATACGCCCGAACCTGCGCCAGTCGCGGCCTGACGCTGTCCAGCTGGCATTTACAGAGCCAGTGCTCGCCCAAGTGTCCTGCTGGAATGGAGTACAGCGAATGCGCCCCGACCTGCTCCACTTCCTGTCAGAACGTAAACATCCAGGAAGTCTGCAAGGAGGAGTGTGTGGACGGATGCAACTGTCCAGCGGGTAAGGTGCTGGATGGAGATCGCTGTGTTGACGTCTCTCAGTGCTCCTGCACACATGCTGGACGCAGATACCCTCCTGCTTCCTCCATATCACAAGACTGCAACACATGCGTCTGTCGCCATGGATCATGGGAATGCACCAATGAAGAATGCCCTGGGGAGTGTATGGTGACAGGACAGTCTCATTATAAGACCTTCGACAATAAGTTCTTCACCTTCAGTGGTATATGTCAGTATCTGCTGGCTAAAGACTGCCAGAGCAACTCTTTTTCTGTCATCATTGAGACGGCACAGTGTGCCGAAGACCAAGATGCTGTCTGCACACGGTCAATTTCACTGAGGTTCCAGGATCTGGCCAATCAGACGGTGCGTCTCAAGCATGGGGGCGTGGTCTCTGTGGATGGAATGGATGTGCAGACGCCTCTAATTAATGGTGCATTAAGAATCCAGACTACTGTGTTTTCCTCTGTGAGATTGCGTTATGGTGATGATCTGCATCTGGATTGGGATGGTAGAGGACGCGTTTTGCTCAGGctaAACCCAGCCTATGCTGGGAAAACGTGCGGCCTGTGCGGTAATTATAATGGTAACCAAGGAGACGACTTCTTAACAGTGGGCGGGCTGGTGGAGACGCGCGTTGAAGGATTCGGCAACGCATGGAAGATGAACGCAGACTGTGACAATGTTCAACTGCAACCCTCAGATCCCTGCATTTTAAACCCTAAGAGAGTGCGTTTTGCAGAAGAGGCCTGCGCCGTGCTGCTCTCTGCGAAGTTTGAGCCCTGTCATACTGCGGTCAACACTGAGCCGTATGTCAAAAACTGTCGCTATGATGTCTGCTCCTGCGCAGACAGCCAAGAGTGCCTGTGTGATGCCGTTCAAAGCTACGCAGCCGCCTGCGCAGCCAAGGGAGTGCTAGTCAACTGGAGGGGACATGGATATTGTGaACTGACCTGTCCGGATGACCAGGTGTATGaggtgtgtgggagtgtgtgtaaTCAGACGTGCCGCTCTCTGTCGCTGCCTGACAGTGAATGCAGTGGCTTCTGTGAGGAAGGCTGTTTCTGCCCTAGAGGACTCTTCCTCAGTGACGCGGGCGAGTGTGTGCCGCCCAAACACTGCTCATGTCACCATAACGGAGAGATCTTTGAGCCCAACGACATGATCGGTGACCATCACTCCATCTGTGTATGCGAGAGTGGATCCATGCACTGCACTTCTAATGAAGCCACAGGATCTACTCTGTCTGACCTCTTCTTTGATGAACAGTCTTCTTCCAGAGGGCGGCGCTCTATCTCTTGTCCTCCTCCGCTGCAGCGGtttgagtgtgagagtgtgagggATGCTGGGATAGAGTGTGCCAAGACCTGCCAGAATCTGGACCTGGAGTGTGTTAGTCAGGGGTGTGTGTCTGGCTGTATGTGTCCACCTGGAACGGTTCGGCACAAAAAAGGATGCATTCCACACGAACAGTGCCCCTGTTACCATAACAACCGACCCTACGACTCAGGACACAGCATTAATGTGGACTGCAACACCTGTGTTTGTGAGAAGCGTCAGTGGAAGTGTACGCAGCGTGTGTGTGACGGTGTGTGTCGCGTGATTGGAGAGACACACTACATCAGCTTCGATGGACTCAAGTTCTCCTTTCCTGGACCTTGTCAATACGTTCTAGCTCAGGATTACTGTAACGGGTTGGACGGCACGTTTAGGGTCCTGGTGGAGAACTCGGCGTGTGGCATCGCAGGCTACCGCTGCAGTAAAAGCATCGTAGTGTTGTACATGGGAGGACTGATTGTCATGGAACACAATGAGGTGAGGATGAAGAAGCCCGTGTTGAAAGAGACAGCGGTTGAGATTGTGCGCTCTGGACAGTATTATATCCTCCTTCTGGGTAAACACATCTCCATCACCTGGGACACAGGAACCAGAATCTCACTGCAGATCAATGGACTGTACagggggAAAGTCTGTGGCCTTTGTGGAAATTTCGACGGCAGTCAGAATAATGATCTGTTGAGCAGCAGTAATCAAATGGAGGTGGATGCTGCAGACTTTGGAAACTCCTGGAAAGTTCGCCCCAGCTGTCCTGACGCTGTTCCGGTTTTGTCTCAGTGCAGCACAGACATGGTGAAGCTGGTGACGGTGGAGCAGTCCTGCCGCGTGCTCACCAGCACCATCTTCAGAGAGTGCAATGGCGTgGTGGACCCGGAGCCGTACTGGGACATCTGTACTCATGACACATGCTCGTGTCCGTCTGTGGGTGACTGTGCGTGTTTCTGTAACACCATTGCCGCATACGCTCACGAGTGTGCCCAGAAGGGCCTGGTGGTGAACTGGAGGTCCAACGACTTGTGCCCCCTGAGCTGTGAGGAGTTGAATAAGGACGCAGAGGTGGAGTGTGAGTGGAAATATAACGCCTGTGGAAGGGCTTGTCCTGCCAGCTGCCAGCACCCTGAGCCCCTGAGCTGTCCCGTCACGTGTGTGGAGGGATGCCATGCTGTCTGCCCACCAGGGCAAGTTTTAGATGAGGTGCTGAGGAAGTGTGTGGAATCGTCCCAGTGTCAGATTTGTCACTGCGAGAGCAACACGTTGACGTGCGCCCCGTGTCCCGTCAATGGTTTCGCCTCCACCCTAGCACCAACTACCATCAGCAACACCCCCACGCCGCTCCCGTTCTCCACCCCGGTGCCTGCCGACGCCTGCGACAGAGCGATGGACCTGGCCTTCCTCGTGGACGGCTCCGCTGCCCTGAGTGAGGAAGACTTCAGCTTGGTCAAGCTCTTCATCCTCCGGGTGGTGGAGCGCTTCCGCATGGGTTCGGCCCACACCCGTGCCACGGTCCTGGTCTTCCACTCCGGCGTGAAAAGTTACGAGATGCAGGTGCAGAAGTGGATCTTCAAGAAGATGGTGCGCGAGCTGCGTTACAGCGGAGGCGATGTTGCGTTCATGGACGAGGCTATTAAATATCTAGCGGTTTACATTTACGACAAAAACAAGCGCAAGGACGCGGGCCGCGTCGCTGTCTTGCTGACGGCGAGCGCGAATCCTCGGGCCATGCGTAGTACTCAGAGGCTGCTGCGTAAGAAAGACATCACGGTCCTCACGGTGGCGTTAGGGCCTGACGTCAACATGGCACAGGTTAATGAGATCACGCAAGCCACCCCCAGCAGTCGCTCATACTTGGTGAGCAGCGTGACGGAGCTGGACGATCAAGCTCTGGGCATCATCGACTACCTCTGCACTTTGGGTTTGGATCCAAAACCGCCGATGAAACCCTCTACTACGAAATCCAGCACCACTTCGGTTACTCCGACCACTACCGCCCCCACGATTCCTCCAACCACTGCCACTGTGACCGCATTTCCCAGCATTCCCAGCCCCGGAACGACTCTTCCTCCATCTACCGTGACGACATACgagattgtgtttttgttggaGAGCTCAGATGCAGTAGGCGAAGAGGGCTTCAATAAAACGCGCGACGCTTTGGTCGAAGTCATTGCTTCGCTTGATCAAAAAGAGGTGGAGAACCTCCGGATCACAGTGATGCAGTACTCCTTCACGGTGAACGTAGTAATCAGCCGCATGGAGATAGAGTCCAGGGAGCAGGTGGTACAGAGAATGCGACAATTGCGTTGGACCAAAGGTTCGGAGGTCAACACGGGCCATGCAATCAGTTCCATATACAAGACGATCACTACAGGCTCGCCCAGTAATGCACCAGACCAGATGGTGTTTCTCATCACACAGAGCCCTCCGACAGACGTCATTCAGAGGCCTCCGAGCTCCGCTCATAAGAAAGTGTACCCCGTTGGGATCGGCCAGCAGATTCGATACGAGGATCTGGCACAGCTGAGCTTCCCGGATGAACCGATTATGTTGAACAGTCCCTCGGATCTTTGGATACTGCGAAACAAACTCATCAATATCAGTAAAACCATCAGAAGGCCCGTGCTGCCCACACTGCCACCGAGAGCCACGCTGCCCCCTTCAGTGCCGTGTTCAAAGCCTATGGACGTGCTGTTCCTGCTGAGAGCCTCTTCTGACAGCCAGTTTGACGACTTAAAAAGCTTTGTTAAAACCTTTATAAAAAGCGCAAATATCGGCCGCAATGACACGCAGGTGGCGGTAATGGTGTACGGGGCGAAATCAGCAGTTGCAGTCACATGGAGAGATGAACAGACAGAAGACAACCTTCTCCAGCTTTTAGGAACCTTACGAAGCAAGACAGACAACACAACACGACTGGGAGCTGCTCTGCGATTGGCCGTGCAGACAGCCATTTCCTCCACCAGCGGGGGACGGATGGGCATCCCTAAAGCTGTGGTTATGGTTGTGACTGACAGGTCAATAGACTCGGTGCAAGAGGCGGCAAACGAAGCTCTGACCGCTGGTGTGTCAGTGTTTCCTATCGGACTGGGTAACCAGTATGACCAGACTGAACTGAGCACGCTCGCGGGACGACACGCTCAGGACAACATCATCCGGCTCAGCAGCACAGAGTACCTGCTCGCCATGGCTGCCCTCGACCAGTCGTTCACAGACAGACTGTGCAGGGCGGGTCCTCCTGGAGTGTGTGTAGATGATGAAGGGAATGAACGGAAGCCCGGGGAGACATGGCTGTTGTCAGATGGCTGTCACTCAGTGCTGTGCAACCCATCAGGAACGGTAACAGTGCAGAGCCACCGCATCAACTGTGAGAAGATGGAGCCTCCCGTCTGCAAAAACAACCTCCCGCCCCTACGCTACAATCACACCTGCGGCTGTACCTGGACCTGCCCCTGTAGTTGCATGGGCAGCTCCACCAGTCACGTCGTGTCATTTTCGGGTGCAGCTCTGAAGCTGAAAGACGCTTGCTCCTATTTGCTGCTTCGCTCAGGAGGGGTGGAGCTAGTGTTGCATACAGCTGTCTGTCAAAGCTCGCCCAATCAGATCTGCATGAAGAGTCTGGAGCTCAAGGAGGGTGGGACGAGTGTGGTGCTGCGGGATGACATGAAGGTGACCGTGGGAGGTGTGAATACCGCTGTCCCATTCAGGAGTGAGGGAGTGACTGTGACACAAATTGGTGCAATACTGCACCAGCTGAGATCAGAGCAGCATGGATTCACTCTCACCTTCACTCCCCACAGCAATGAGTTCATGGTCAATATGGACATCTCCATGAAGCCCAACACTACTGGCTTATGTGgttcCTGCTCTGATGATCAGACGGGTCTGGTGTTATCTGACGGCCGCGTGACCACAGACCCTGACGTGTATCTGAAGGGCTGGGCTCTGGGCGAGTGTGTCAGTGTGTCGGGTGTGGATTACTGTGCTATGGGGGTGACGAAGGGCTGTGATGTGTTGAGTTCTGAGGTGTTTAGCCGCTGTCACGAGCTGGTCCCTCCGCAGGACTATGAGCAGATCTGCCGGACCGTGGCCTGCCAGCCTAACGCGTTGTGTGACCTTGTTGCGGCGTACAGCAGCATGTGCCGTCAGcagggagtgtgtgtggacTGGAGGACGCCCACCCTCTGCCCCATGTCATGCTCAGACTCTCTGGAATACGCTGCGTGTCGAACCGGATGTTTGGAGCGGTGCGGACAGAGCCAGTTCAGTCCTGGTGACATGATGGGTGATGGTTTAATGAAGGGCAATGGATCAGTGTGCTTGAACACTCCCACAGAGGGCTGTTTCTGCCCTGAAGGGTCTGTGTTAATGGGAGATAAGTGTGTAAGCAAAGAAACCTGCAACCAGTGTGTGGACCAACATGGGAAAACACACAAGtttatGGAAAGCTGGAATCCTGAGGAGAACCCctgtcttctgtgtgtgtgtctggatcAGCAGCACATTAACTGCACCGTGTTACCCTGCACTAATGCTAAAGCCCCAGAGTGTGGACAATGTGAGGTTCTTCGGGAGAAGATGGGATCTAAGTGCTGCCCTGAATATGAGTGTGtgtGTGACCCCAACTGTAAGCGGTCAGATCCCCCTCCCTGCGCTCATGGGCTCAGTGTCGTCCTCACAAACCCTGGAGATTGTCTGCCAGTTTACCAATGTgTTTGCAAAAAGGATCAGTGTCCTGTGACAACAAAACCATCCTGCCCCGCATACAAGAAGCTGTCGGTCACGCCGTCGGAGTGCTGCGATTCATATGAATGTGTGTGCGACTGTCGAAACATCACCCGCACCTGTCCCCCGGGCTACATCACGAAGACCACCGTCAATGACTGCGACTGCATAGAGGTCACCTGCACACCTGATAAGGTGTGTGTGGTGGACGCTGCGGTCTACCAGGTGGGCAGTGGGTGGGAGGAGAAGTGTAAAACCTGCACCTGCACGGAgcaagcagacagacagaccggCCTGCACATCGCTCAGTGTGTGGACCCCGTCTGCAACCAGATCTGTCCTCTGgGAACCACATACTCTCACTCAGAGGACGAGTGCTGTGGTCGCTGCCGTAAATCCAGCTGCATGGAAGGAGGACGTTTGAGACAGGTGGGAGAGCAGTGGGTGTCTCCGCAGGACAGATGTGTGTGGAGCGAATGTGTTCAGGTCAACGAGGAAGTGTTCATCCAGCATATAAACGTATCCTGCCACCTCATGGACACGCCAACCTGTCCACTGGGCACAGAGCTCCAGTGCAATACAGTAGAAAACTGCTGCCCGACCTGCCACTGCGTTCCGATGGACGTCTGCGTGCTGAATCAAACTGTTATTGCGgcTGGAGAGCGGGTGATGGTGGATGTGTGCACGCACTgcgagtgtgtgagagataaGAGGAGTTATCGGCTCTCTTGCAGGAAAATGAGCTGCTCTCCCTGCTCAGAGGGATACACACTGGAGCCGATTCCTAACGCTTGCTGCGGACGCTGTGTAGCAACTGCGTGTAGCATTCGACAACCTGACGGGCAGCTGGTCGCTCTGAAAgCAAATGCAACGCGTACAGATGGCTGCACTAAACATACATGCAGTGTGAATAAGGATGAAGAACTGGTGCTAGAGACGCTTGTGACAACATGTCCTCCGTTTGACCGAAAAAGCTGTCTGGAACATgggGGTAAAATAAGCCAGATTGGAGACACCTGCTGCGAAATATGTACTGAGCCAGAGTGCAGAAGGACTGTGGGTTTGCTGAATTACATTAGAGTGAATGACTGCCAGTCGGAAGAAAAGATACAACTCACTTACTGCGAGGGAAACTGCGGCAGCAAGTCTATGTACTCACTAGACAAGCACAAGGtcgagagcgagtgtgtgtgttgctcaGCTACAGGCACGGTGCCCATGAATGTTCCCCTGCGCTGCGCTAAcggcacacaaacacaccaccAAGTCCTCGCCGTCACCGGCTGCGACTGCATGTCACACGCCTGTCCGGCCAACTGAAAGCAGACACCTGATAAAATAACACAGAAGCGAAAAACCTCTACAGTACACTTTCGTATATGCGTCTACAGCCGGTATGTTGCTCAGCGGCTTTTTATAACCGCTGATAATAGAGCACTTTAtcatacatttctgtttttttatttcaacgtATAAAGCATTGCATCACGAGTCATTTCTGATTACTACTGCTTTGCCATTTTGCCAGTAAACAACCTGTCTATGCAAATGTATTCTTGACCGTGCGCGACTATTATGTGTGGTTGCAGTTTAAGGGTGTTTATTAGAATGACCTGCAATAAAGGACGAGGCTAAACAAGTGCCGGACTTGTGCCGCTCGGTGGTGCTCTGGACGCTTGAACTCATTTGTGTGAAGAGCGTCCGTGTGCGTGGAGAATACTGATCAGTCGATTAGTCGTGAAGGGTGTTGAAGGATGCAATTCACACACGAGTCGCGCGTTAAGTACTtgtcatgaaatattaaaacatatcaaTAACAA

Function

GO:

id name namespace
GO:0007599 hemostasis biological_process
GO:0005576 extracellular region cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188708 lncRNA upstream 87343 20325330 ~ 20383758 (+) True G127785
TU188734 lncRNA upstream 95266 20373854 ~ 20375835 (+) True G127800
TU188698 lncRNA upstream 189806 20256712 ~ 20281295 (+) True G127780
XR_006253191.1 lncRNA upstream 246517 20221304 ~ 20224584 (+) True LOC122363139
TU188681 lncRNA upstream 255870 20202748 ~ 20215231 (+) False G127766
TU188810 lncRNA downstream 57709 20562083 ~ 20572310 (+) True G127860
TU188825 lncRNA downstream 81677 20586051 ~ 20588863 (+) True G127873
TU188827 lncRNA downstream 92833 20597207 ~ 20600519 (+) False terb1
TU188764 lncRNA downstream 135642 20640016 ~ 20641059 (+) False LOC122362661
XR_006253183.1 lncRNA downstream 137391 20641765 ~ 20647639 (+) True LOC122363025
XM_043264111.1 mRNA upstream 25734 20440144 ~ 20445367 (+) True si:dkey-88e18.2
XM_043264958.1 mRNA upstream 48772 20414016 ~ 20422329 (+) True LOC122363067
XM_043264956.1 mRNA upstream 99504 20364731 ~ 20371597 (+) True dnaja2b
XM_043265078.1 mRNA upstream 149901 20311779 ~ 20321200 (+) True lmf2a
XM_043264574.1 mRNA upstream 159968 20286465 ~ 20311133 (+) False c2cd5
XM_043216714.1 mRNA downstream 1657 20506031 ~ 20531579 (+) True LOC122323072
XM_043216717.1 mRNA downstream 1657 20506031 ~ 20531579 (+) False LOC122323072
XM_043216716.1 mRNA downstream 1657 20506031 ~ 20531579 (+) False LOC122323072
XM_043216718.1 mRNA downstream 1657 20506031 ~ 20531579 (+) False LOC122323072
XM_043264099.1 mRNA downstream 28532 20532906 ~ 20538618 (+) True cers3b
TU188630 other upstream 383520 20086695 ~ 20087581 (+) False zfhx3a
XR_006246956.1 other upstream 457315 20003004 ~ 20013786 (+) False wdr59
TU188266 other upstream 1629566 18777768 ~ 18841535 (+) False G127500
TU188268 other upstream 1688942 18777768 ~ 18782159 (+) True G127500
TU188208 other upstream 1909491 18560366 ~ 18561610 (+) False G127456
TU188799 other downstream 43453 20547827 ~ 20549318 (+) False glipr1b
XR_006246928.1 other downstream 46774 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU189467 other downstream 1896600 22400974 ~ 22406982 (+) True LOC122363143
TU189495 other downstream 1930432 22434806 ~ 22438679 (+) True G128367
TU189951 other downstream 2952726 23457100 ~ 23579802 (+) False cdh13

Expression Profile