RNA id: XM_043264880.1


Basic Information

Item Value
RNA id XM_043264880.1
length 2167
RNA type mRNA
GC content 0.48
exon number 8
gene id arsa
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20928515 ~ 20933433 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GACGGTGATCACGTGATCCAATCGAGACAACATGAAAGACTCCATCAGTTGCAAATGATAGCAATACAGTTTTGAGGAAAGGACTAGACCCAAGGTTCATAGCGAAGCGTTTGTTCATAACAAACCGAGAAGGGGCTGTCATGCTACTTCAATAACgttttgtattaattgtaaAGATTGTGTAAGCTGCGTAATGGCTTTAATGCGCGTAATCGCGTTGCTTGCACTGATCACAGCTCGATGTGCTCGCGCCTCGCCGCCAAACTTCGTGCTGCTGTTCGCCGATGATTTGGGTTACGGTGATCTGGGCTGTTTTGGACACCCGAGCTCCCTCACTCCGAATCTAGACAGACTTGCATCCCACGGGCTCCGGTTTACCGACTTCTACGTCACGAGTCCCGTGTGCAGCCCCTCCAGggcaGCCCTGCTGACGGGCCGCTATCAGACTCGTTCCGGCATCTACCCGGGTGTGCTGTATCCGGCCTCTAAAGGGGGTCTCCCGCTCAACGAGACCACTATTGCAGAGGTGCTGAAGTCTAAGGGTTACACTACAGCCATAGTGGGCAAATGGCACCTGGGCGTTGGGCTGAACGGCACTTACCTGCCCACCAGACAGGGCTTCGACAACTATCTCGGTATCCCATACTCACACGACCAGGGTCCCTGTCAGAATCTCACGTGTTTCCCTCCGGATGTGAAGTGCTTTGGCTTCTGTGATCAGGATGTTGTAACCGTACCTCTCATGTTTAATGAGAACATCAAGCAGCAGCCCGCAGACTTCCTGCAGCTCGAGAAGGCCTACAGTGAATTTGCCACTCAATTCATCAGTGATGCTGTCCAACATAACCGTCCTTTCTTCCTGTACTATCCTTCACATCACACACACTACCCTCAGTATGCAGGCTCAGACTATGCAGGGAAGTCTCCTCGTGGGCCGTTCGGTGACGCTCTGATGGAGTTTGATGGCACTGTGGGGAAGATCCTGCAAACCCTGGAGGAGACGGGGGCGATCAACAACACTCTGGTCTTCTTCACTGGTGACAACGGGCCAGAGCTCATGCGGAAATCACGTGGGGGAAACGCTGGACTGATGAAATGTGGCAAAGGCACGACTTATGAAGGAGGAATGAGAGAGCCAGCCATCGCATATTGGCCTGGATCCATCCAACCAGGTGTGACCCATGCCTTGGCCAGCTCTTTGGACATTCTGCCCACCTTTGCCACACTGGCTGGAGCTGTGTTACCTGACGTTCAGCTAGACGGGGTTGACATGACAAACATCCTGTTGAATCACGGAGAGAGTGAAAGACAGACCATCTTTTACTATCCAGTTTCTCCAAGCGAGAAGTATAGCGTGTTTGCAGTGAGATGGAAAAATTTCAAAGCACACTACTATACACAAGGTGCAATTCACAGTGTTAGCACCCCAGACAGCAACTGCTCATCACTTTTCCTCAAGCGCCATAATCCTCCTTTGCTATATAACATAGAGGCAGACCCATCAGAAAACTATAACCTTAACAGTACAGAATGGGACTCTGTGCTCAAGCTAATCCAGGTCTTCAAGGAGCAGTTTGAGGCTTCTATGGTGTTTGGCGAGAGCGAGATAGCCAAAGGGAGAGACTCTGCACTCGAGCCCTGCTGCATTCCTAATTGCACCCCTAAACCCACATGCTGCCGTTGCAATTCTGCACTTTAGTGGAAGCGGTGACAAGCACCGGCACGCTGCCAAATCATCGAATCACAGTTCACCAGAACGGCGAAAGGCTGATTGTGTTTACATTCTTCAagcaaaaatgcaatgcaaaaagcACAACTTTTCTGGAATCTCGTTTTGGTTCTTTGTTgaagaaaacaactgaaaagataaaaaatgaagttgttgttttttttgtcacagttAATGCCGTATGAATGCTAAAAAGTGTTATTAATTTTCTCTTATCTGTCGGTTTGCAGACCAAAATGTGGCTCTGACTAGTTCACCGATATAATAATAGGCTTTTGACGGCATTTGGTTGTAAAGGGAATAGAGGAGCTATACTGTGAAGTGTCAGTgttattaaaagtgtattttcatTTACTATCAGTCTGCTTTTAACACTGAATCGTTATAATggagtgattttaaaaataaaggaaagaaCACAGgtctaattatatttaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K01134 ARSA; arylsulfatase A

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006253167.1 lncRNA upstream 41400 20869875 ~ 20887115 (+) True LOC122362840
TU188847 lncRNA upstream 280807 20641806 ~ 20647708 (+) False LOC122363025
XR_006253183.1 lncRNA upstream 280876 20641765 ~ 20647639 (+) True LOC122363025
TU188846 lncRNA upstream 284230 20641806 ~ 20644285 (+) False LOC122363025
TU188764 lncRNA upstream 287456 20640016 ~ 20641059 (+) False LOC122362661
TU189179 lncRNA downstream 147336 21080769 ~ 21081291 (+) True G128148
TU189180 lncRNA downstream 195120 21128553 ~ 21129033 (+) True G128149
TU189192 lncRNA downstream 228453 21161886 ~ 21162751 (+) True G128157
TU189193 lncRNA downstream 231839 21165272 ~ 21166073 (+) True G128158
TU189266 lncRNA downstream 533345 21466778 ~ 21468553 (+) True G128216
XM_043263952.1 mRNA upstream 256678 20666753 ~ 20671837 (+) False rabl2
XM_043263951.1 mRNA upstream 256678 20667334 ~ 20671837 (+) True rabl2
XM_043263953.1 mRNA upstream 256678 20667344 ~ 20671837 (+) False rabl2
XM_043265111.1 mRNA upstream 270692 20654532 ~ 20657823 (+) True odf3b
XM_043265109.1 mRNA upstream 270692 20654532 ~ 20657823 (+) False odf3b
XM_043265030.1 mRNA downstream 29695 20963128 ~ 20969701 (+) True chkb
XM_043264247.1 mRNA downstream 36659 20970092 ~ 20972842 (+) True LOC122362691
XM_043264248.1 mRNA downstream 36659 20970092 ~ 20972842 (+) False LOC122362691
XM_043265138.1 mRNA downstream 40082 20973515 ~ 20980699 (+) True cpt1b
XM_043265023.1 mRNA downstream 203373 21136806 ~ 21154598 (+) True impdh1a
XR_006246928.1 other upstream 371888 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU188799 other upstream 379197 20547827 ~ 20549318 (+) False glipr1b
TU188630 other upstream 840934 20086695 ~ 20087581 (+) False zfhx3a
XR_006246956.1 other upstream 914729 20003004 ~ 20013786 (+) False wdr59
TU188268 other upstream 2146356 18777768 ~ 18782159 (+) True G127500
TU189467 other downstream 1467541 22400974 ~ 22406982 (+) True LOC122363143
TU189495 other downstream 1501373 22434806 ~ 22438679 (+) True G128367
TU189951 other downstream 2523667 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 2791203 23724636 ~ 23736846 (+) False cdh13
TU190171 other downstream 3516332 24449765 ~ 24457560 (+) True G128858

Expression Profile