RNA id: TU234874



Basic Information


Item Value
RNA id TU234874
length 447
lncRNA type read_through
GC content 0.48
exon number 2
gene id G158591
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17152825 ~ 17225569 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTGTGCGTGCGTTTATTAGTGTGGGTTGAGAGGATAAAGGCTAAACCAGCATGCTTAAATACATCTTGGCAGGTTTTGTGAATCTtgtatgtgtgggtgtgtgcgtgtgtttgctCAGCCCGCCTCTGCTCTCTCCACAACAGCAAATGAACAAACATGCCATGTTGTGCGGAGCTGGAGCGGTGAGCTAAAGGGCAGGGTGAGGTACGACACTTTACATAGATGTTTAGATACGCTGCACTTAAATGCACAATAGGACAGCCGGGGCTTAACATTCACAGCGTTTAGCATACAACTGTCACGGCCTGCATTGATCCGCGCAAGGGTGAAAGCACACGGCAAATTACACTACAATGCAAAACTAGCCACGCATGCCTTCGAAAGCCTGGGTTCTTGACATGCGTTTCACCTCTCATCTGTGCTTGCGGAAAAAAGTGAACTTTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234861 lncRNA downstream 70141 17082207 ~ 17082684 (-) True G158587
TU234860 lncRNA downstream 70273 17082207 ~ 17082552 (-) False G158587
TU234706 lncRNA downstream 424482 16728101 ~ 16728343 (-) True G158484
TU234705 lncRNA downstream 425110 16727438 ~ 16727715 (-) True G158483
TU234703 lncRNA downstream 428422 16723931 ~ 16724403 (-) True G158481
TU234890 lncRNA upstream 64402 17289971 ~ 17291543 (-) True G158605
TU234898 lncRNA upstream 85759 17311328 ~ 17338919 (-) False G158608
TU234897 lncRNA upstream 108275 17333844 ~ 17335245 (-) True G158608
TU234920 lncRNA upstream 157773 17383342 ~ 17386554 (-) True G158628
TU234925 lncRNA upstream 168452 17394021 ~ 17395422 (-) True G158632
XM_043225103.1 mRNA downstream 145539 16832085 ~ 17007286 (-) True plxna2
XM_043225251.1 mRNA downstream 471137 16680306 ~ 16681688 (-) True LOC122329053
XM_043225250.1 mRNA downstream 475458 16674237 ~ 16677367 (-) True LOC122329052
XM_043224317.1 mRNA downstream 536486 16609478 ~ 16616339 (-) True LOC122328572
XM_043224027.1 mRNA downstream 607137 16541514 ~ 16545688 (-) True LOC122328366
XM_043223974.1 mRNA upstream 68609 17294178 ~ 17302565 (-) True csrnp2
XM_043225140.1 mRNA upstream 77642 17303211 ~ 17315390 (-) False tfcp2
XM_043225139.1 mRNA upstream 77642 17303211 ~ 17315390 (-) True tfcp2
XM_043225290.1 mRNA upstream 91059 17316628 ~ 17330887 (-) False pou6f1
XM_043225289.1 mRNA upstream 91059 17316628 ~ 17330887 (-) True pou6f1
TU234495 other downstream 794120 16357652 ~ 16358705 (-) False G158336
TU234490 other downstream 909430 16240810 ~ 16243395 (-) True tac3a
TU234433 other downstream 982991 16143833 ~ 16169834 (-) True G158288
TU234366 other downstream 1143910 16008106 ~ 16008915 (-) True G158231
TU234274 other downstream 1435575 15699269 ~ 15717250 (-) False LOC122329227
TU234899 other upstream 113698 17339267 ~ 17343385 (-) True G158609
TU235255 other upstream 820369 18045938 ~ 18047878 (-) False march9
XR_006247822.1 other upstream 1006074 18231643 ~ 18235536 (-) False hnrnpa1b
TU235534 other upstream 1521822 18747391 ~ 18754712 (-) True G159076

Expression Profile