RNA id: TU235093



Basic Information


Item Value
RNA id TU235093
length 236
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G158774
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17943925 ~ 17944160 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGCATGGGCTCTTTATAATTTGATCTATTGTTCTTTGCAATCCACGAGGTCGTTCATGAGTAGACGGCCGGCATTTAGATAAATGAACATGTCAATTGTTCTAATGGCATTTTTATGGCAAGAAGCAAATTAGAGCATTTCAACAGCCGCATTTCCTTTTTGAAGCCAAAAATAGAGGGCATTATTAATTCACAGGAAATGGGGCAGCCTGGGGGAGGGACGGGCGCGAGGATTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247788.1 lncRNA downstream 99823 17799842 ~ 17844102 (-) True LOC122328377
TU235009 lncRNA downstream 195423 17746530 ~ 17748502 (-) True G158706
TU234910 lncRNA downstream 521620 17413703 ~ 17422305 (-) False coq10a
TU234925 lncRNA downstream 548503 17394021 ~ 17395422 (-) True G158632
TU234920 lncRNA downstream 557371 17383342 ~ 17386554 (-) True G158628
TU235252 lncRNA upstream 55673 17999833 ~ 18001690 (-) True G158887
TU235259 lncRNA upstream 67966 18012126 ~ 18015877 (-) True G158892
TU235247 lncRNA upstream 97750 18041910 ~ 18043476 (-) True G158882
TU235329 lncRNA upstream 248810 18192970 ~ 18193557 (-) True G158947
TU235328 lncRNA upstream 250092 18194252 ~ 18194524 (-) True G158946
XM_043225425.1 mRNA downstream 6346 17935574 ~ 17937579 (-) True LOC122329235
XM_043225426.1 mRNA downstream 6348 17935574 ~ 17937577 (-) False LOC122329235
XM_043225389.1 mRNA downstream 17721 17924639 ~ 17926204 (-) True LOC122329192
XM_043225388.1 mRNA downstream 19422 17922587 ~ 17924503 (-) True ubxn10
XM_043224158.1 mRNA downstream 29388 17879067 ~ 17914537 (-) True vwa5b1
XM_043223966.1 mRNA upstream 101766 18045926 ~ 18058739 (-) True march9
XM_043225144.1 mRNA upstream 121110 18065270 ~ 18070963 (-) True tspan31
XM_043225198.1 mRNA upstream 158151 18102311 ~ 18105120 (-) True gpr182
XM_043224710.1 mRNA upstream 163725 18107885 ~ 18116326 (-) True pip4k2ca
XM_043224711.1 mRNA upstream 176135 18120295 ~ 18123704 (-) True igfbp6b
TU234899 other downstream 600540 17339267 ~ 17343385 (-) True G158609
TU234864 other downstream 764146 17176652 ~ 17179779 (-) False slc48a1a
TU234495 other downstream 1585220 16357652 ~ 16358705 (-) False G158336
TU234490 other downstream 1700530 16240810 ~ 16243395 (-) True tac3a
TU234433 other downstream 1774091 16143833 ~ 16169834 (-) True G158288
TU235255 other upstream 101778 18045938 ~ 18047878 (-) False march9
XR_006247822.1 other upstream 287483 18231643 ~ 18235536 (-) False hnrnpa1b
TU235534 other upstream 803231 18747391 ~ 18754712 (-) True G159076

Expression Profile