Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU235252 |
| length | 570 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G158887 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 17999833 ~ 18001690 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0044085 | cellular component biogenesis | biological_process |
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0031497 | chromatin assembly | biological_process |
| GO:0048468 | cell development | biological_process |
| GO:0006323 | DNA packaging | biological_process |
| GO:0006325 | chromatin organization | biological_process |
| GO:0022607 | cellular component assembly | biological_process |
| GO:0006333 | chromatin assembly or disassembly | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0071824 | protein-DNA complex subunit organization | biological_process |
| GO:0065004 | protein-DNA complex assembly | biological_process |
| GO:0034728 | nucleosome organization | biological_process |
| GO:0071840 | cellular component organization or biogenesis | biological_process |
| GO:0030154 | cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0014866 | skeletal myofibril assembly | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0071103 | DNA conformation change | biological_process |
| GO:0006996 | organelle organization | biological_process |
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0009653 | anatomical structure morphogenesis | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0016043 | cellular component organization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU235093 | lncRNA | downstream | 55673 | 17943925 ~ 17944160 (-) | True | G158774 |
| XR_006247788.1 | lncRNA | downstream | 155731 | 17799842 ~ 17844102 (-) | True | LOC122328377 |
| TU235009 | lncRNA | downstream | 251331 | 17746530 ~ 17748502 (-) | True | G158706 |
| TU234910 | lncRNA | downstream | 577528 | 17413703 ~ 17422305 (-) | False | coq10a |
| TU234925 | lncRNA | downstream | 604411 | 17394021 ~ 17395422 (-) | True | G158632 |
| TU235259 | lncRNA | upstream | 10436 | 18012126 ~ 18015877 (-) | True | G158892 |
| TU235247 | lncRNA | upstream | 40220 | 18041910 ~ 18043476 (-) | True | G158882 |
| TU235329 | lncRNA | upstream | 191280 | 18192970 ~ 18193557 (-) | True | G158947 |
| TU235328 | lncRNA | upstream | 192562 | 18194252 ~ 18194524 (-) | True | G158946 |
| TU235338 | lncRNA | upstream | 193709 | 18195399 ~ 18196369 (-) | True | G158948 |
| XM_043225425.1 | mRNA | downstream | 62254 | 17935574 ~ 17937579 (-) | True | LOC122329235 |
| XM_043225426.1 | mRNA | downstream | 62256 | 17935574 ~ 17937577 (-) | False | LOC122329235 |
| XM_043225389.1 | mRNA | downstream | 73629 | 17924639 ~ 17926204 (-) | True | LOC122329192 |
| XM_043225388.1 | mRNA | downstream | 75330 | 17922587 ~ 17924503 (-) | True | ubxn10 |
| XM_043224158.1 | mRNA | downstream | 85296 | 17879067 ~ 17914537 (-) | True | vwa5b1 |
| XM_043223966.1 | mRNA | upstream | 44236 | 18045926 ~ 18058739 (-) | True | march9 |
| XM_043225144.1 | mRNA | upstream | 63580 | 18065270 ~ 18070963 (-) | True | tspan31 |
| XM_043225198.1 | mRNA | upstream | 100621 | 18102311 ~ 18105120 (-) | True | gpr182 |
| XM_043224710.1 | mRNA | upstream | 106195 | 18107885 ~ 18116326 (-) | True | pip4k2ca |
| XM_043224711.1 | mRNA | upstream | 118605 | 18120295 ~ 18123704 (-) | True | igfbp6b |
| TU234899 | other | downstream | 656448 | 17339267 ~ 17343385 (-) | True | G158609 |
| TU234864 | other | downstream | 820054 | 17176652 ~ 17179779 (-) | False | slc48a1a |
| TU234495 | other | downstream | 1641128 | 16357652 ~ 16358705 (-) | False | G158336 |
| TU234490 | other | downstream | 1756438 | 16240810 ~ 16243395 (-) | True | tac3a |
| TU234433 | other | downstream | 1829999 | 16143833 ~ 16169834 (-) | True | G158288 |
| TU235255 | other | upstream | 44248 | 18045938 ~ 18047878 (-) | False | march9 |
| XR_006247822.1 | other | upstream | 229953 | 18231643 ~ 18235536 (-) | False | hnrnpa1b |
| TU235534 | other | upstream | 745701 | 18747391 ~ 18754712 (-) | True | G159076 |
