RNA id: TU235255


Basic Information

Item Value
RNA id TU235255
length 1252
RNA type TUCP
GC content 0.51
exon number 3
gene id march9
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18045926 ~ 18058739 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGAGAGGCTCCTGGAGCTGTGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCCATCAGCACCAAGAACCCGCTGCAGTGGCAGGCCATTTCTCTGACGGTGATTGAGAAGGTGCAGATCGCCGCCATTATCCTGGGCTCACTCTTCCTCATCGCCAGTATCTCGTGGCTGGTGTGGTCTTCTCTCAGCCCGTCTGCCAAGTGGCAGCGCCAGGACCTGCTCTTCCAGATCTGCTACGGCATGTACGGCTTCATGGACATTGTGTGCATAGGCCTTATAATCCACGAGGGCTCATCGGTGTATAGAATCTTCAAGCGATGGCAGGCTGTGAACCAGCAGTGGAAAGTATTGAACTATGAGAAGTCGAAGGACTTGGGAGACCCGGTGAGCTCCAGCAGCAAGGCGGGCGGCCGCGGCTCTCGCAGCAACCCTCACGGCCTGGCCAGCGGCAGCAGGGGGGGCCAGCGAGTGCGGCGGTTAAGGACTATCCTCAACCACCACTGCGGTTACACCATCCTCCACATCCTCAGCCAGCTGCGGCCCAGCGACACGCGGCTCGGCACCGCCACCAACCGCGAGGTGGTCATGCGGGTCACGACCGTATGAGGTCGCCCCCCGGAGCGAGAGAAGACGCGTTTTCTGCCTTCTCCTGCAAAAGACGGCGTCACGATGCCAGGACGAAcgcgtttttttttccttggtgACGACGTTTCGGACAGACAGGAGCGCGCACGGGACATTGGCGCCAGCCGTTTCTATCGGCGAGACTCTCTCATGATCCTAGCACACTATTGCATTTTTAAGTTCGATTTCCTCgctggtgttgtttttttatcgaTGCggtttttaaaaacgttttgatTTTCTAAGGGAGAATGGTACATGGAGCAACACCGACGTGTGATGTATATGGTGACTCATGTGGACCTATCGTTGTAAATGATGTTTACGGATGCTTCTGACGCAGCAAGAAAGCCAACCATAACCAAACGATCACGACACAATAACCAGGGAAAAAACGAGATACGAATTGTTACatactaaaatatatcaaaGGGGAGGGTGCAATAAGACATAATAAGATTATACAGAGAACAAAAAGACGTAAACGTTTGAAAAGAATTTGATCTTCTCTGCAATAAAGATacctgtacattttacagtgaCCTTTGCATGAGGGTAGAGTTTTATGCCTCCTCGACACATGGACatgatgaatttgttttattcagaatGGTGCTCGTTTGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU235247 lncRNA downstream 2462 18041910 ~ 18043476 (-) True G158882
TU235259 lncRNA downstream 30061 18012126 ~ 18015877 (-) True G158892
TU235252 lncRNA downstream 44248 17999833 ~ 18001690 (-) True G158887
TU235093 lncRNA downstream 101778 17943925 ~ 17944160 (-) True G158774
XR_006247788.1 lncRNA downstream 201836 17799842 ~ 17844102 (-) True LOC122328377
TU235329 lncRNA upstream 145092 18192970 ~ 18193557 (-) True G158947
TU235328 lncRNA upstream 146374 18194252 ~ 18194524 (-) True G158946
TU235338 lncRNA upstream 147521 18195399 ~ 18196369 (-) True G158948
TU235339 lncRNA upstream 147939 18195817 ~ 18196251 (-) False G158948
TU235340 lncRNA upstream 152889 18200767 ~ 18200966 (-) True G158949
XM_043225425.1 mRNA downstream 108359 17935574 ~ 17937579 (-) True LOC122329235
XM_043225426.1 mRNA downstream 108361 17935574 ~ 17937577 (-) False LOC122329235
XM_043225389.1 mRNA downstream 119734 17924639 ~ 17926204 (-) True LOC122329192
XM_043225388.1 mRNA downstream 121435 17922587 ~ 17924503 (-) True ubxn10
XM_043224158.1 mRNA downstream 131401 17879067 ~ 17914537 (-) True vwa5b1
XM_043225144.1 mRNA upstream 17392 18065270 ~ 18070963 (-) True tspan31
XM_043225198.1 mRNA upstream 54433 18102311 ~ 18105120 (-) True gpr182
XM_043224710.1 mRNA upstream 60007 18107885 ~ 18116326 (-) True pip4k2ca
XM_043224711.1 mRNA upstream 72417 18120295 ~ 18123704 (-) True igfbp6b
XM_043224702.1 mRNA upstream 114582 18162460 ~ 18177490 (-) True lima1a
TU234899 other downstream 702553 17339267 ~ 17343385 (-) True G158609
TU234864 other downstream 866159 17176652 ~ 17179779 (-) False slc48a1a
TU234495 other downstream 1687233 16357652 ~ 16358705 (-) False G158336
TU234490 other downstream 1802543 16240810 ~ 16243395 (-) True tac3a
TU234433 other downstream 1876104 16143833 ~ 16169834 (-) True G158288
XR_006247822.1 other upstream 183765 18231643 ~ 18235536 (-) False hnrnpa1b
TU235534 other upstream 699513 18747391 ~ 18754712 (-) True G159076

Expression Profile