Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043224588.1 |
| length | 1087 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | copz1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 18214578 ~ 18220380 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0030117 | membrane coat | cellular_component |
| id | description |
|---|---|
| K20472 | COPZ, RET3; coatomer subunit zeta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU235343 | lncRNA | downstream | 8120 | 18206143 ~ 18206458 (-) | True | G158952 |
| TU235341 | lncRNA | downstream | 11126 | 18203036 ~ 18203452 (-) | True | G158950 |
| TU235340 | lncRNA | downstream | 13612 | 18200767 ~ 18200966 (-) | True | G158949 |
| TU235338 | lncRNA | downstream | 18209 | 18195399 ~ 18196369 (-) | True | G158948 |
| TU235339 | lncRNA | downstream | 18327 | 18195817 ~ 18196251 (-) | False | G158948 |
| TU235344 | lncRNA | upstream | 17517 | 18237897 ~ 18238532 (-) | True | G158953 |
| TU235346 | lncRNA | upstream | 24543 | 18244923 ~ 18246827 (-) | True | G158955 |
| TU235357 | lncRNA | upstream | 75864 | 18296244 ~ 18302575 (-) | False | hoxc1a |
| TU235355 | lncRNA | upstream | 121981 | 18342361 ~ 18350347 (-) | False | hoxc6a |
| XR_006247816.1 | lncRNA | upstream | 201479 | 18421859 ~ 18456506 (-) | True | LOC122328626 |
| XM_043224702.1 | mRNA | downstream | 37088 | 18162460 ~ 18177490 (-) | True | lima1a |
| XM_043224711.1 | mRNA | downstream | 90874 | 18120295 ~ 18123704 (-) | True | igfbp6b |
| XM_043224710.1 | mRNA | downstream | 98252 | 18107885 ~ 18116326 (-) | True | pip4k2ca |
| XM_043225198.1 | mRNA | downstream | 109458 | 18102311 ~ 18105120 (-) | True | gpr182 |
| XM_043225144.1 | mRNA | downstream | 143615 | 18065270 ~ 18070963 (-) | True | tspan31 |
| XM_043224578.1 | mRNA | upstream | 11393 | 18231773 ~ 18235536 (-) | False | hnrnpa1b |
| XM_043224577.1 | mRNA | upstream | 12029 | 18232409 ~ 18235536 (-) | True | hnrnpa1b |
| XM_043225278.1 | mRNA | upstream | 75666 | 18296046 ~ 18301717 (-) | True | hoxc1a |
| XM_043224321.1 | mRNA | upstream | 94453 | 18314833 ~ 18316762 (-) | True | hoxc3a |
| XM_043224329.1 | mRNA | upstream | 96257 | 18316637 ~ 18330701 (-) | True | hoxc4a |
| TU235255 | other | downstream | 166700 | 18045938 ~ 18047878 (-) | False | march9 |
| TU234899 | other | downstream | 871193 | 17339267 ~ 17343385 (-) | True | G158609 |
| TU234864 | other | downstream | 1034799 | 17176652 ~ 17179779 (-) | False | slc48a1a |
| TU234495 | other | downstream | 1855873 | 16357652 ~ 16358705 (-) | False | G158336 |
| TU234490 | other | downstream | 1971183 | 16240810 ~ 16243395 (-) | True | tac3a |
| XR_006247822.1 | other | upstream | 11263 | 18231643 ~ 18235536 (-) | False | hnrnpa1b |
| TU235534 | other | upstream | 527011 | 18747391 ~ 18754712 (-) | True | G159076 |
