RNA id: XM_043225426.1


Basic Information

Item Value
RNA id XM_043225426.1
length 1370
RNA type mRNA
GC content 0.46
exon number 2
gene id LOC122329235
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17935574 ~ 17937579 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCACCTCCAACAGAACAACAGCTAGCTTTCACGAGACAGTGTGCTTTTAACATTGACTCAAGGTCGGCTTCTTCCAGTGCCAAACTCGATTTTTCCCGATTTTCACCTCCGTACTGATGGGGAGCGGAAAAGCCCAATACCAGCCAAaacaatgaacatttattacaattctGGTAAGTCACCTCTGCAGCTGATGTGAGGAAATCTCTATAATCTTTATAAAAGGACCCAAGGACCACACCGTCATGGAAAACGTAACCCAATTCCAAATCGATTTCCAGTGCTATCTCTTCACCCCCGTCTACAGCCTGGTCTTGTTTTTTGGACTGATAGGAAATCTCGGAGCTTTGTATTACTTCATCTTCAAAATCAAACAGAAATCTCCTTCAAACGTATACATCATTAACCTGGCTGTGGCCGACACGCTTTTCTTGTTCGCCTTGCCATTTCGTATCCACTACCACCTCAATAACAGCAACTGGATATTTGGCGACGCCATGTGCCGCATCACCGGCACGATCTTCTTCGCCAACATCTACATCAGCATCAGCTTCATGACCTGCATCTGCGTGGACCGTTACATCGCCACCCTCCACCCTCACACCTACTTGAAGCTTCGCAACACCAATCTGGCGACCCTGGTGAGCACCGCAGTATGGTTGGTGTCTGGGTCAGCCATGTTGGCGTTCATGTTAACGTGCCCGCTATCAAGTAAAGCCAAGATGTGTTTTGAAGGCTTCAGTCCAAAAGAGTGGAGTGACTTGGCGCCCTACAGCATAAGCATTCTCATTTTTGGATCCCTTCTGCCTTCCGTGGTCATCCTGGTCTGTTACCCCATTGTGGCCTGTCGTATCGCCCACATCAGCAACTCCACCGCCCGCGAGGCACGACGGATCATATATGCCATCCTAATTATCACACTCCTGTGTTTCCTTCCTTATCACATCGTGCATCTTGCGTACCTCTTGGCACGCTTGAGAGAGAATGAACCGTATGTGATGTTCATCCTCCGTCGGTTGACCATGGCTCTGGTCAGCCTAAACAGCATCTTGGACCCGCTTTTGTACTACTTTGCAACAGGCCACTACACGTGGAGGTTCAAAAGACTGAGGCTGAAGAAGAAAACGGGGGTTTATTCCATTTCCAAAGGCTTTTGAGCGTCTATTTCAGTAAAAATGCACGAACAATTTTCTGAAGTCAAAAAAACTGCAATGCAGAAATATGGACTCCAGTGTGGCTTGATGAAACTGTCAAAATTTTTCTCAAATAACTGTACTACTACAGTACAAAATCAAACAAGACTATTTGTATTACGTAACAGCAAACTTATTGATAGGCTGATATGTTGGCCAATGTTTGGCTCTTTTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247788.1 lncRNA downstream 91472 17799842 ~ 17844102 (-) True LOC122328377
TU235009 lncRNA downstream 187072 17746530 ~ 17748502 (-) True G158706
TU234910 lncRNA downstream 513269 17413703 ~ 17422305 (-) False coq10a
TU234925 lncRNA downstream 540152 17394021 ~ 17395422 (-) True G158632
TU234920 lncRNA downstream 549020 17383342 ~ 17386554 (-) True G158628
TU235093 lncRNA upstream 6348 17943925 ~ 17944160 (-) True G158774
TU235252 lncRNA upstream 62256 17999833 ~ 18001690 (-) True G158887
TU235259 lncRNA upstream 74549 18012126 ~ 18015877 (-) True G158892
TU235247 lncRNA upstream 104333 18041910 ~ 18043476 (-) True G158882
TU235329 lncRNA upstream 255393 18192970 ~ 18193557 (-) True G158947
XM_043225389.1 mRNA downstream 9370 17924639 ~ 17926204 (-) True LOC122329192
XM_043225388.1 mRNA downstream 11071 17922587 ~ 17924503 (-) True ubxn10
XM_043224158.1 mRNA downstream 21037 17879067 ~ 17914537 (-) True vwa5b1
XM_043224047.1 mRNA downstream 98602 17834843 ~ 17836972 (-) True fam43b
XM_043224106.1 mRNA downstream 139144 17788980 ~ 17796430 (-) True LOC122328416
XM_043223966.1 mRNA upstream 108349 18045926 ~ 18058739 (-) True march9
XM_043225144.1 mRNA upstream 127693 18065270 ~ 18070963 (-) True tspan31
XM_043225198.1 mRNA upstream 164734 18102311 ~ 18105120 (-) True gpr182
XM_043224710.1 mRNA upstream 170308 18107885 ~ 18116326 (-) True pip4k2ca
XM_043224711.1 mRNA upstream 182718 18120295 ~ 18123704 (-) True igfbp6b
TU234899 other downstream 592189 17339267 ~ 17343385 (-) True G158609
TU234864 other downstream 755795 17176652 ~ 17179779 (-) False slc48a1a
TU234495 other downstream 1576869 16357652 ~ 16358705 (-) False G158336
TU234490 other downstream 1692179 16240810 ~ 16243395 (-) True tac3a
TU234433 other downstream 1765740 16143833 ~ 16169834 (-) True G158288
TU235255 other upstream 108361 18045938 ~ 18047878 (-) False march9
XR_006247822.1 other upstream 294066 18231643 ~ 18235536 (-) False hnrnpa1b
TU235534 other upstream 809814 18747391 ~ 18754712 (-) True G159076

Expression Profile