RNA id: TU23276


Basic Information

Item Value
RNA id TU23276
length 1282
RNA type TUCP
GC content 0.39
exon number 8
gene id LOC122330541
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 115623 ~ 127087 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAAGTGCTTGGCAAAGCTTCTGAGCTACGCTGAGTTTGACAGAGCCGTGATCATCGCCCTGTTTGTGTTGGTGTTTGTGTTCTGCCTCTGCAAAGCCTTTTACATTTTAGCGACAGAGGTCTGGAAGAAAACCGGACAGGCACTTAAGATCTTTAATCTCGTGGCTGATATGATCTTTCAGATTCTGCCAACTTTACagttcatcctcctcttctacACGTTTGGATCGACCAGAGGAGGAttcatcataattattattgtaccACTGTTAATGCTGATGATGAATGACGCATGGCTTAAAAGATGCTATTATAGACTGGGCTTTTCACTTTCAGTTGTGAAGACAGGATGATCATCTTCATATTGGTGACTAATGCAGTGATGATCGTTCTTTACATATTCACTCTGGACTATCAAACAGGTGATGTTTATAATAAAGAGCGACACTGATCTTGTCTGAGGACAGAAGAGCTGACTCTTGTGTTTCAGATGCGATTGGATGGGGCTGTGTTGTGATGTTTCTGCAGGTTCGCTGGACGCTCATGTTCTTCACAGATTATATTTATGGTTTTCTCAGATTGTCTCAAGGTTTTCAGCGTTATGTTGCTGTGTATGTGTTTGGATCAGTTGTTGTAGTTTTACTGAACTCTGCATTAATAACAGAAATGATCCTGAAATCAGcgTCTGGAGGCCGTGTGATGGCTGATCTCAGAttcattgtgtttctgtctgaGTGTTTATTTGCTGTATCTCTGATGATTTCTGCGTTCTTAGGATCCAAGATCACAGACTGTCTGAAGTCTTGTCAGAAGAAAGCGAGACCGAGACGAGTCAAAAGATCCCAGAAGAACCAGAACTCAGAAGAAGAGAGGATTTCTCTGAAGACTGTAGATACAGCGCTGTCTCAAACATGATAAAGAAAGTATTACAGAGTGATCCTGAACACGTTAAAGCTGCTTTCAGTCAACGGATGGATTGTGAGCAGCAcctaacaaactaaaatatgtcCATCAGATCTGCACTGATCCACTGACGTGTTTTTTGGAAATAGctgtaaatttatattttgtatatatgtgtaaaatctttttttaaagactcaTTCTAGTAATACACATATTAGACTTCAGAATCTGTACTGGCCGATCTCAGacgacttttttattttttatatggtCAAAGAAAACAGGTGCATTTTTCTCAGTCCTGTTAACAAAACtcttacagtaaataaaatcatattccAAAATATATCAACAATTTCCTTCATTTTCCCCTCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248051.1 lncRNA downstream 17581 78990 ~ 98042 (-) True LOC122330677
TU23258 lncRNA downstream 36691 76265 ~ 78932 (-) True G15659
TU23245 lncRNA downstream 55922 59154 ~ 59701 (-) True G15648
XR_006248196.1 lncRNA downstream 76139 36910 ~ 39484 (-) True LOC122331514
TU23283 lncRNA upstream 53313 180400 ~ 398863 (-) True G15666
TU23300 lncRNA upstream 76413 203500 ~ 214466 (-) True G15674
TU23235 lncRNA upstream 89351 216438 ~ 220173 (-) True G15638
TU23305 lncRNA upstream 171781 298868 ~ 299335 (-) True G15679
TU23260 lncRNA upstream 185151 312238 ~ 345825 (-) True G15660
XM_043226568.1 mRNA downstream 1456 98964 ~ 114167 (-) True LOC122329903
XM_043226932.1 mRNA upstream 203507 330594 ~ 332560 (-) True LOC122330108
XM_043227344.1 mRNA upstream 207223 334310 ~ 335420 (-) True LOC122330392
XM_043226393.1 mRNA upstream 223775 350862 ~ 375111 (-) False LOC122329794
XM_043226384.1 mRNA upstream 223775 350862 ~ 375111 (-) True LOC122329794
XM_043226407.1 mRNA upstream 226142 353229 ~ 375111 (-) False LOC122329794
TU23402 other upstream 539213 666300 ~ 669325 (-) True G15742
TU23449 other upstream 701672 828759 ~ 831043 (-) True G15773
TU23471 other upstream 770514 897601 ~ 899290 (-) False LOC122332393
TU23851 other upstream 982404 1109491 ~ 1114702 (-) True G16048
TU23858 other upstream 1016716 1143803 ~ 1145517 (-) False LOC122329780

Expression Profile