RNA id: XM_043240703.1


Basic Information

Item Value
RNA id XM_043240703.1
length 753
RNA type mRNA
GC content 0.46
exon number 4
gene id LOC122346050
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1900627 ~ 1905499 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atgggtgccATTGATGCGTCATGCCTTACGTGGGAGGGTCAGCAATTCCAGGGAAAAGCGGCAATTGTCGAAAAGCTTTCCagCCTGCCCTTCACAAAAATAGCTCACAGCATCACAGCACAAGACCATCAGCCCACCCCTGATAGCTGCATATTGAGTATGGTAGTAGGCCAACTAAAAGCAGATGATGACCCCATCATGGGATTCCATCAGAGCTTCATCCTGAAGAACATTAACGAGGCGTGGGTTTGCACCAATGACATGTTCCGCCTGGCGCTGCACAATTTTGGTTAAACGCCCCATGGCTAGCAGGAGGGAAGTGGGGGAAGGTGGAGGATGGGGTTCTACCCTGATGACGCCCAAACCTGTCAATCAGCCCTTCATTCATCACACTCGAGAGAAACGCCACCGGATTACAGCGGTCAATCACAGAAAACGTGCAGGCACATACAGTACTGCCTCTACTACAGAAATGACATGTTTCTTTGCTGAAAGCCCACACATCCATCAAACTGACCCTTTTCCTTCCTGCAACCTGCATGATGATGGGGAGCTTAAATATCAGAGGACGCCCTGACCAGGACAAATTCGTATTAACCTAACCTCGGCTgtttgatatttacattttagttgctGATTTTGACTCTGAAATAACAACTGTCGTACTGTCTTTCTTTGCTTTAGTACAAAGTGTGTTCAGCTTGTTTTTAGAATATGCCCATTGaagtttaatcttttttttttttttttttt

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47971 lncRNA upstream 114985 1785401 ~ 1785642 (+) True G32552
TU47959 lncRNA upstream 133737 1766596 ~ 1766890 (+) True G32542
XR_006251105.1 lncRNA upstream 135220 1762921 ~ 1765407 (+) True LOC122346170
TU47957 lncRNA upstream 138345 1762005 ~ 1762282 (+) True G32540
TU47956 lncRNA upstream 138656 1761564 ~ 1761971 (+) True G32539
TU48091 lncRNA downstream 52836 1958118 ~ 1958584 (+) True G32643
TU48092 lncRNA downstream 60897 1966179 ~ 1966378 (+) True G32644
TU48094 lncRNA downstream 86267 1991549 ~ 1993168 (+) True G32646
TU48090 lncRNA downstream 90738 1996020 ~ 1997056 (+) True G32642
TU48097 lncRNA downstream 92897 1998179 ~ 1998593 (+) False G32649
XM_043240712.1 mRNA upstream 202 1899595 ~ 1900425 (+) False LOC122346055
XM_043240710.1 mRNA upstream 202 1899601 ~ 1900425 (+) True LOC122346055
XM_043239188.1 mRNA upstream 8523 1882015 ~ 1892104 (+) True LOC122345241
XM_043239187.1 mRNA upstream 20619 1878085 ~ 1880008 (+) True LOC122345240
XM_043240700.1 mRNA upstream 24579 1865595 ~ 1876048 (+) True LOC122346048
XM_043240708.1 mRNA downstream 1645 1906927 ~ 1917452 (+) True LOC122346053
XM_043240123.1 mRNA downstream 104935 2010217 ~ 2019150 (+) True LOC122345711
XM_043240752.1 mRNA downstream 273301 2178583 ~ 2207545 (+) True LOC122346081
XM_043240758.1 mRNA downstream 344376 2249658 ~ 2264585 (+) True LOC122346086
XM_043239536.1 mRNA downstream 364931 2270213 ~ 2277034 (+) True LOC122345419
TU48056 other upstream 57614 1835148 ~ 1843013 (+) True G32620
TU48046 other upstream 74513 1822654 ~ 1826114 (+) True G32611
TU47965 other upstream 107384 1791860 ~ 1793243 (+) False ccl19a.2
TU47619 other upstream 785222 1112496 ~ 1115405 (+) False selenoe
TU47584 other upstream 843474 1055193 ~ 1057153 (+) True G32277
TU48087 other downstream 105129 2010411 ~ 2018459 (+) False LOC122345711
TU48185 other downstream 359863 2265145 ~ 2268194 (+) True G32706
TU48610 other downstream 1699904 3605186 ~ 4144396 (+) False G33015
TU48613 other downstream 1699904 3605186 ~ 4144396 (+) True G33015
TU48849 other downstream 2717225 4622507 ~ 4623060 (+) True G33174