Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU186967 |
| length | 1088 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 5 |
| gene id | G138196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 1041533 ~ 1044679 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU186966 | lncRNA | downstream | 2451 | 1037867 ~ 1039082 (-) | True | G138195 |
| TU186927 | lncRNA | downstream | 176762 | 857948 ~ 864771 (-) | True | G138166 |
| TU186921 | lncRNA | downstream | 261000 | 775619 ~ 780533 (-) | True | G138160 |
| TU186893 | lncRNA | downstream | 535095 | 485697 ~ 506438 (-) | True | G138136 |
| TU186332 | lncRNA | downstream | 615005 | 426235 ~ 426528 (-) | True | G137721 |
| TU186970 | lncRNA | upstream | 1617 | 1046296 ~ 1047398 (-) | True | G138198 |
| TU186986 | lncRNA | upstream | 172795 | 1217474 ~ 1218913 (-) | True | G138209 |
| TU187003 | lncRNA | upstream | 205033 | 1249712 ~ 1250937 (-) | True | G138226 |
| XR_002651003.1 | lncRNA | upstream | 226132 | 1270811 ~ 1299166 (-) | True | LOC111194256 |
| TU187017 | lncRNA | upstream | 253675 | 1298354 ~ 1339115 (-) | True | G138231 |
| XM_022677748.1 | mRNA | downstream | 15067 | 991893 ~ 1026466 (-) | True | tnn |
| XM_022677749.1 | mRNA | downstream | 15069 | 991893 ~ 1026464 (-) | False | tnn |
| XM_022677750.1 | mRNA | downstream | 15072 | 991893 ~ 1026461 (-) | False | tnn |
| XM_022677741.1 | mRNA | downstream | 290953 | 718023 ~ 750580 (-) | True | pappa2 |
| XM_022677681.1 | mRNA | downstream | 324210 | 695950 ~ 717323 (-) | True | LOC111194217 |
| XM_022677756.1 | mRNA | upstream | 45558 | 1090237 ~ 1102807 (-) | True | trove2 |
| NM_001291255.1 | mRNA | upstream | 300385 | 1345064 ~ 1360413 (-) | True | shh |
| XM_022677761.1 | mRNA | upstream | 410774 | 1455453 ~ 1487674 (-) | True | lmbr1 |
| XM_022677762.1 | mRNA | upstream | 447137 | 1491816 ~ 1497588 (-) | True | LOC111194257 |
| XM_007229174.3 | mRNA | upstream | 465954 | 1510633 ~ 1523685 (-) | True | dcaf8 |
| TU186914 | other | downstream | 334585 | 695903 ~ 706948 (-) | False | LOC111194217 |
| TU186973 | other | upstream | 5853 | 1050532 ~ 1101493 (-) | True | G138199 |
| TU187245 | other | upstream | 1434102 | 2478781 ~ 2486751 (-) | False | LOC103042176 |
| XR_002651005.1 | other | upstream | 2005721 | 3050400 ~ 3062759 (-) | True | LOC103045355 |
| TU187730 | other | upstream | 2788042 | 3832721 ~ 3833670 (-) | True | G138708 |
| TU187750 | other | upstream | 2803321 | 3848000 ~ 3851682 (-) | False | LOC103047802 |
