Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU186986 |
| length | 593 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G138209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 1217474 ~ 1218913 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU186970 | lncRNA | downstream | 170076 | 1046296 ~ 1047398 (-) | True | G138198 |
| TU186967 | lncRNA | downstream | 172795 | 1041533 ~ 1044679 (-) | True | G138196 |
| TU186966 | lncRNA | downstream | 178392 | 1037867 ~ 1039082 (-) | True | G138195 |
| TU186927 | lncRNA | downstream | 352703 | 857948 ~ 864771 (-) | True | G138166 |
| TU186921 | lncRNA | downstream | 436941 | 775619 ~ 780533 (-) | True | G138160 |
| TU187003 | lncRNA | upstream | 30799 | 1249712 ~ 1250937 (-) | True | G138226 |
| XR_002651003.1 | lncRNA | upstream | 51898 | 1270811 ~ 1299166 (-) | True | LOC111194256 |
| TU187017 | lncRNA | upstream | 79441 | 1298354 ~ 1339115 (-) | True | G138231 |
| TU187014 | lncRNA | upstream | 79528 | 1298441 ~ 1336595 (-) | False | G138231 |
| TU187018 | lncRNA | upstream | 117985 | 1336898 ~ 1368873 (-) | False | G138231 |
| XM_022677756.1 | mRNA | downstream | 114667 | 1090237 ~ 1102807 (-) | True | trove2 |
| XM_022677748.1 | mRNA | downstream | 191008 | 991893 ~ 1026466 (-) | True | tnn |
| XM_022677749.1 | mRNA | downstream | 191010 | 991893 ~ 1026464 (-) | False | tnn |
| XM_022677750.1 | mRNA | downstream | 191013 | 991893 ~ 1026461 (-) | False | tnn |
| XM_022677741.1 | mRNA | downstream | 466894 | 718023 ~ 750580 (-) | True | pappa2 |
| NM_001291255.1 | mRNA | upstream | 126151 | 1345064 ~ 1360413 (-) | True | shh |
| XM_022677761.1 | mRNA | upstream | 236540 | 1455453 ~ 1487674 (-) | True | lmbr1 |
| XM_022677762.1 | mRNA | upstream | 272903 | 1491816 ~ 1497588 (-) | True | LOC111194257 |
| XM_007229174.3 | mRNA | upstream | 291720 | 1510633 ~ 1523685 (-) | True | dcaf8 |
| XM_022677764.1 | mRNA | upstream | 291720 | 1510633 ~ 1522531 (-) | False | dcaf8 |
| TU186973 | other | downstream | 115981 | 1050532 ~ 1101493 (-) | True | G138199 |
| TU186914 | other | downstream | 510526 | 695903 ~ 706948 (-) | False | LOC111194217 |
| TU187245 | other | upstream | 1259868 | 2478781 ~ 2486751 (-) | False | LOC103042176 |
| XR_002651005.1 | other | upstream | 1831487 | 3050400 ~ 3062759 (-) | True | LOC103045355 |
| TU187730 | other | upstream | 2613808 | 3832721 ~ 3833670 (-) | True | G138708 |
| TU187750 | other | upstream | 2629087 | 3848000 ~ 3851682 (-) | False | LOC103047802 |
| TU188022 | other | upstream | 3112737 | 4331650 ~ 4335889 (-) | False | LOC103034146 |
