Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC111190139 |
| length | 611 |
| RNA type | V_segment |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC111190139 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172441.1 |
| NCBI id | APWO02002039.1 |
| chromosome length | 306493 |
| location | 106306 ~ 107015 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0010035 | response to inorganic substance | biological_process |
| GO:0010038 | response to metal ion | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384740 | lncRNA | upstream | 66638 | 38119 ~ 39668 (+) | True | G280298 |
| TU384738 | lncRNA | upstream | 68650 | 36371 ~ 37656 (+) | True | G280297 |
| TU384731 | lncRNA | upstream | 74773 | 22417 ~ 31533 (+) | True | G280290 |
| TU384778 | lncRNA | downstream | 22735 | 129750 ~ 134727 (+) | False | G280313 |
| TU384807 | lncRNA | downstream | 70564 | 177579 ~ 177994 (+) | False | LOC111190164 |
| TU384824 | lncRNA | downstream | 84723 | 191738 ~ 247699 (+) | True | G280332 |
| TU384826 | lncRNA | downstream | 100559 | 207574 ~ 207855 (+) | True | G280334 |
| TU384837 | lncRNA | downstream | 133339 | 240354 ~ 249052 (+) | True | G280338 |
| XM_022663913.1 | mRNA | downstream | 126797 | 233812 ~ 236578 (+) | True | LOC111190154 |
| XM_007242509.3 | mRNA | downstream | 133333 | 240348 ~ 244545 (+) | True | LOC103040202 |
| XM_022663914.1 | mRNA | downstream | 139565 | 246580 ~ 258409 (+) | True | LOC111190155 |
| XM_022663915.1 | mRNA | downstream | 179044 | 286059 ~ 287629 (+) | True | LOC111190159 |
| LOC111190141 | other | upstream | 1512 | 102943 ~ 104794 (+) | True | LOC111190141 |
| LOC111190147 | other | upstream | 5978 | 97575 ~ 100328 (+) | True | LOC111190147 |
| LOC111190140 | other | upstream | 9745 | 95984 ~ 96561 (+) | True | LOC111190140 |
| TU384788 | other | upstream | 13693 | 92137 ~ 92613 (+) | True | G280315 |
| LOC103027076 | other | upstream | 23343 | 82398 ~ 82963 (+) | True | LOC103027076 |
| LOC111190143 | other | downstream | 2512 | 109527 ~ 115605 (+) | True | LOC111190143 |
| LOC111190130 | other | downstream | 20030 | 127045 ~ 127570 (+) | True | LOC111190130 |
| LOC111190129 | other | downstream | 24569 | 131584 ~ 132154 (+) | True | LOC111190129 |
| LOC111190131 | other | downstream | 27164 | 134179 ~ 134669 (+) | True | LOC111190131 |
| LOC111190148 | other | downstream | 30535 | 137550 ~ 139641 (+) | True | LOC111190148 |
