RNA id: TU384731


Basic Information

Item Value
RNA id TU384731
length 258
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G280290
representative True

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 22417 ~ 31533 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CTTTAGATGAGAGTTGCTGTACATATGTTAAACCTGCATGTGTGACTTCACAGCTGTATTTGGTGTCCTTGCTTGTTTTGTTGGCTTGAAGCAAACTGACAGCTTTGAAAGAGCCTGTAGGACTTTCAGTAATTTCCCAGTCAATGCCTTTGACTTCCTGGTTGTCTTCTTTCCACTTAATACTGAGCTTTTTTGGGGAGAAGTCCTCAATTAAACACATAATAGATTGACCAACTTCACCCACGTGGATGACTGGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU384738 lncRNA downstream 4838 36371 ~ 37656 (+) True G280297
TU384740 lncRNA downstream 6586 38119 ~ 39668 (+) True G280298
TU384778 lncRNA downstream 98217 129750 ~ 134727 (+) False G280313
TU384807 lncRNA downstream 146046 177579 ~ 177994 (+) False LOC111190164
TU384824 lncRNA downstream 160205 191738 ~ 247699 (+) True G280332
XM_022663913.1 mRNA downstream 202279 233812 ~ 236578 (+) True LOC111190154
XM_007242509.3 mRNA downstream 208815 240348 ~ 244545 (+) True LOC103040202
XM_022663914.1 mRNA downstream 215047 246580 ~ 258409 (+) True LOC111190155
XM_022663915.1 mRNA downstream 254526 286059 ~ 287629 (+) True LOC111190159
LOC107197483 other upstream 6276 15658 ~ 16141 (+) True LOC107197483
LOC111190138 other downstream 12291 43824 ~ 44531 (+) True LOC111190138
LOC111190144 other downstream 25516 57049 ~ 57561 (+) True LOC111190144
LOC103027076 other downstream 50865 82398 ~ 82963 (+) True LOC103027076
TU384788 other downstream 60604 92137 ~ 92613 (+) True G280315
LOC111190140 other downstream 64451 95984 ~ 96561 (+) True LOC111190140

Expression Profile