Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105210 |
| length | 566 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 6 |
| gene id | G78023 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 3834562 ~ 3840570 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105207 | lncRNA | downstream | 8947 | 3823445 ~ 3825615 (-) | True | G78022 |
| TU105203 | lncRNA | downstream | 19829 | 3813935 ~ 3814733 (-) | True | G78019 |
| XR_002650299.1 | lncRNA | downstream | 214314 | 3572023 ~ 3620248 (-) | True | LOC111193169 |
| XR_002650298.1 | lncRNA | downstream | 216108 | 3572023 ~ 3618454 (-) | False | LOC111193169 |
| XR_002650300.1 | lncRNA | downstream | 216108 | 3572023 ~ 3618454 (-) | False | LOC111193169 |
| XR_002650302.1 | lncRNA | upstream | 29991 | 3870561 ~ 3872428 (-) | True | LOC111193171 |
| TU105229 | lncRNA | upstream | 36185 | 3876755 ~ 3879254 (-) | True | G78039 |
| TU105243 | lncRNA | upstream | 82745 | 3923315 ~ 3993581 (-) | True | G78044 |
| TU105260 | lncRNA | upstream | 172182 | 4012752 ~ 4013009 (-) | True | G78054 |
| TU105297 | lncRNA | upstream | 274202 | 4114772 ~ 4115105 (-) | True | G78087 |
| XM_022672608.1 | mRNA | downstream | 120205 | 3645097 ~ 3714357 (-) | True | prkd1 |
| XM_022672609.1 | mRNA | downstream | 120546 | 3645097 ~ 3714016 (-) | False | prkd1 |
| XM_007257936.3 | mRNA | downstream | 530995 | 3302159 ~ 3303567 (-) | True | ankrd9 |
| XM_022672601.1 | mRNA | downstream | 627876 | 3175798 ~ 3206686 (-) | True | bmf |
| XM_007257920.3 | mRNA | downstream | 627881 | 3175798 ~ 3206681 (-) | False | bmf |
| XM_022672614.1 | mRNA | upstream | 40749 | 3881319 ~ 3909337 (-) | False | strn3 |
| XM_022672612.1 | mRNA | upstream | 40749 | 3881319 ~ 3909335 (-) | True | strn3 |
| XM_007257905.3 | mRNA | upstream | 77086 | 3917656 ~ 3952193 (-) | False | hectd1 |
| XM_007257910.3 | mRNA | upstream | 77086 | 3917656 ~ 3952193 (-) | False | hectd1 |
| XM_007257904.3 | mRNA | upstream | 77086 | 3917656 ~ 3952193 (-) | False | hectd1 |
| TU105108 | other | downstream | 120285 | 3691607 ~ 3714277 (-) | False | prkd1 |
| XR_002650301.1 | other | downstream | 195647 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105040 | other | downstream | 485573 | 3297582 ~ 3348989 (-) | True | G77892 |
| TU104917 | other | downstream | 628346 | 3197129 ~ 3206216 (-) | False | bmf |
| TU104742 | other | downstream | 1643909 | 2190313 ~ 2190653 (-) | True | G77656 |
| TU105293 | other | upstream | 204864 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105554 | other | upstream | 1344222 | 5184792 ~ 5186358 (-) | True | G78297 |
| TU105931 | other | upstream | 3358779 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| XR_002650306.1 | other | upstream | 3435830 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| XR_002650309.1 | other | upstream | 4792305 | 8632875 ~ 8641745 (-) | False | spdya |
