Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105554 |
| length | 458 |
| RNA type | TUCP |
| GC content | 0.63 |
| exon number | 2 |
| gene id | G78297 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 5184792 ~ 5186358 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105532 | lncRNA | downstream | 5999 | 5177075 ~ 5178793 (-) | True | G78279 |
| TU105516 | lncRNA | downstream | 536809 | 4610006 ~ 4647983 (-) | True | G78266 |
| TU105515 | lncRNA | downstream | 575643 | 4607908 ~ 4609149 (-) | True | G78265 |
| TU105483 | lncRNA | downstream | 666482 | 4438587 ~ 4518310 (-) | True | G78241 |
| TU105371 | lncRNA | downstream | 854177 | 4329092 ~ 4330615 (-) | True | G78143 |
| TU105553 | lncRNA | upstream | 2650 | 5189008 ~ 5204565 (-) | True | G78296 |
| TU105552 | lncRNA | upstream | 15737 | 5202095 ~ 5204565 (-) | False | G78296 |
| TU105560 | lncRNA | upstream | 18289 | 5204647 ~ 5204974 (-) | True | G78302 |
| TU105555 | lncRNA | upstream | 18728 | 5205086 ~ 5207646 (-) | True | G78298 |
| TU105567 | lncRNA | upstream | 119678 | 5306036 ~ 5306240 (-) | True | G78309 |
| XM_022672631.1 | mRNA | downstream | 506382 | 4666571 ~ 4678410 (-) | False | togaram1 |
| XM_022672630.1 | mRNA | downstream | 506382 | 4666571 ~ 4678410 (-) | True | togaram1 |
| XM_022672629.1 | mRNA | downstream | 519305 | 4626434 ~ 4665487 (-) | True | fancm |
| XM_022672628.1 | mRNA | downstream | 519306 | 4624101 ~ 4665486 (-) | False | fancm |
| XM_022672627.1 | mRNA | downstream | 519306 | 4624101 ~ 4665486 (-) | False | fancm |
| XM_007258927.3 | mRNA | upstream | 24371 | 5210729 ~ 5262996 (-) | True | luzp1 |
| XM_007230052.3 | mRNA | upstream | 1502946 | 6689304 ~ 6707961 (-) | True | LOC103024242 |
| XM_022672638.1 | mRNA | upstream | 1502946 | 6689304 ~ 6695275 (-) | False | LOC103024242 |
| XM_007230053.3 | mRNA | upstream | 1527098 | 6713456 ~ 6722276 (-) | True | LOC103024548 |
| XM_022672639.1 | mRNA | upstream | 1562760 | 6749118 ~ 6768199 (-) | True | nphp1 |
| TU105293 | other | downstream | 978408 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105210 | other | downstream | 1344222 | 3834562 ~ 3840570 (-) | True | G78023 |
| TU105108 | other | downstream | 1470515 | 3691607 ~ 3714277 (-) | False | prkd1 |
| XR_002650301.1 | other | downstream | 1545877 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105040 | other | downstream | 1835803 | 3297582 ~ 3348989 (-) | True | G77892 |
| TU105931 | other | upstream | 2012991 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| XR_002650306.1 | other | upstream | 2090042 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| XR_002650309.1 | other | upstream | 3446517 | 8632875 ~ 8641745 (-) | False | spdya |
| TU106477 | other | upstream | 3464579 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650312.1 | other | upstream | 4651620 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
