Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105560 |
| length | 328 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G78302 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 5204647 ~ 5204974 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105553 | lncRNA | downstream | 82 | 5189008 ~ 5204565 (-) | True | G78296 |
| TU105552 | lncRNA | downstream | 82 | 5202095 ~ 5204565 (-) | False | G78296 |
| TU105532 | lncRNA | downstream | 25854 | 5177075 ~ 5178793 (-) | True | G78279 |
| TU105516 | lncRNA | downstream | 556664 | 4610006 ~ 4647983 (-) | True | G78266 |
| TU105515 | lncRNA | downstream | 595498 | 4607908 ~ 4609149 (-) | True | G78265 |
| TU105555 | lncRNA | upstream | 112 | 5205086 ~ 5207646 (-) | True | G78298 |
| TU105567 | lncRNA | upstream | 101062 | 5306036 ~ 5306240 (-) | True | G78309 |
| TU105574 | lncRNA | upstream | 129876 | 5334850 ~ 5345392 (-) | True | G78316 |
| TU105610 | lncRNA | upstream | 247139 | 5452113 ~ 5477842 (-) | True | G78345 |
| TU105620 | lncRNA | upstream | 298810 | 5503784 ~ 5529776 (-) | True | G78352 |
| XM_022672631.1 | mRNA | downstream | 526237 | 4666571 ~ 4678410 (-) | False | togaram1 |
| XM_022672630.1 | mRNA | downstream | 526237 | 4666571 ~ 4678410 (-) | True | togaram1 |
| XM_022672629.1 | mRNA | downstream | 539160 | 4626434 ~ 4665487 (-) | True | fancm |
| XM_022672628.1 | mRNA | downstream | 539161 | 4624101 ~ 4665486 (-) | False | fancm |
| XM_007258927.3 | mRNA | upstream | 5755 | 5210729 ~ 5262996 (-) | True | luzp1 |
| XM_007230052.3 | mRNA | upstream | 1484330 | 6689304 ~ 6707961 (-) | True | LOC103024242 |
| XM_022672638.1 | mRNA | upstream | 1484330 | 6689304 ~ 6695275 (-) | False | LOC103024242 |
| XM_007230053.3 | mRNA | upstream | 1508482 | 6713456 ~ 6722276 (-) | True | LOC103024548 |
| XM_022672639.1 | mRNA | upstream | 1544144 | 6749118 ~ 6768199 (-) | True | nphp1 |
| TU105554 | other | downstream | 18289 | 5184792 ~ 5186358 (-) | True | G78297 |
| TU105293 | other | downstream | 998263 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105210 | other | downstream | 1364077 | 3834562 ~ 3840570 (-) | True | G78023 |
| TU105108 | other | downstream | 1490370 | 3691607 ~ 3714277 (-) | False | prkd1 |
| XR_002650301.1 | other | downstream | 1565732 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105931 | other | upstream | 1994375 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| XR_002650306.1 | other | upstream | 2071426 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| XR_002650309.1 | other | upstream | 3427901 | 8632875 ~ 8641745 (-) | False | spdya |
| TU106477 | other | upstream | 3445963 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650312.1 | other | upstream | 4633004 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
