Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105610 |
| length | 657 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G78345 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 5452113 ~ 5477842 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105574 | lncRNA | downstream | 106721 | 5334850 ~ 5345392 (-) | True | G78316 |
| TU105567 | lncRNA | downstream | 145873 | 5306036 ~ 5306240 (-) | True | G78309 |
| TU105555 | lncRNA | downstream | 244467 | 5205086 ~ 5207646 (-) | True | G78298 |
| TU105560 | lncRNA | downstream | 247139 | 5204647 ~ 5204974 (-) | True | G78302 |
| TU105553 | lncRNA | downstream | 247548 | 5189008 ~ 5204565 (-) | True | G78296 |
| TU105620 | lncRNA | upstream | 25942 | 5503784 ~ 5529776 (-) | True | G78352 |
| TU105648 | lncRNA | upstream | 887566 | 6365408 ~ 6365971 (-) | True | G78377 |
| TU105647 | lncRNA | upstream | 888363 | 6366205 ~ 6399749 (-) | True | G78376 |
| TU105646 | lncRNA | upstream | 901278 | 6379120 ~ 6381367 (-) | True | G78375 |
| TU105657 | lncRNA | upstream | 908545 | 6386387 ~ 6387950 (-) | True | G78384 |
| XM_007258927.3 | mRNA | downstream | 189117 | 5210729 ~ 5262996 (-) | True | luzp1 |
| XM_022672631.1 | mRNA | downstream | 773703 | 4666571 ~ 4678410 (-) | False | togaram1 |
| XM_022672630.1 | mRNA | downstream | 773703 | 4666571 ~ 4678410 (-) | True | togaram1 |
| XM_022672629.1 | mRNA | downstream | 786626 | 4626434 ~ 4665487 (-) | True | fancm |
| XM_022672627.1 | mRNA | downstream | 786627 | 4624101 ~ 4665486 (-) | False | fancm |
| XM_007230052.3 | mRNA | upstream | 1211462 | 6689304 ~ 6707961 (-) | True | LOC103024242 |
| XM_022672638.1 | mRNA | upstream | 1211462 | 6689304 ~ 6695275 (-) | False | LOC103024242 |
| XM_007230053.3 | mRNA | upstream | 1235614 | 6713456 ~ 6722276 (-) | True | LOC103024548 |
| XM_022672639.1 | mRNA | upstream | 1271276 | 6749118 ~ 6768199 (-) | True | nphp1 |
| XM_022672644.1 | mRNA | upstream | 1417086 | 6894928 ~ 6924055 (-) | False | LOC103025187 |
| TU105554 | other | downstream | 265755 | 5184792 ~ 5186358 (-) | True | G78297 |
| TU105293 | other | downstream | 1245729 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105210 | other | downstream | 1611543 | 3834562 ~ 3840570 (-) | True | G78023 |
| TU105108 | other | downstream | 1737836 | 3691607 ~ 3714277 (-) | False | prkd1 |
| XR_002650301.1 | other | downstream | 1813198 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105931 | other | upstream | 1721507 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| XR_002650306.1 | other | upstream | 1798558 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| XR_002650309.1 | other | upstream | 3155033 | 8632875 ~ 8641745 (-) | False | spdya |
| TU106477 | other | upstream | 3173095 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650312.1 | other | upstream | 4360136 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
