Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105993 |
| length | 382 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G78642 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 7361774 ~ 7362155 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko00520 | Amino sugar and nucleotide sugar metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105988 | lncRNA | downstream | 15335 | 7343165 ~ 7346439 (-) | True | G78638 |
| TU105990 | lncRNA | downstream | 20792 | 7340679 ~ 7340982 (-) | True | G78639 |
| TU105902 | lncRNA | downstream | 433730 | 6927373 ~ 6928044 (-) | True | G78568 |
| TU105889 | lncRNA | downstream | 454910 | 6898752 ~ 6906864 (-) | True | G78566 |
| TU105886 | lncRNA | downstream | 471369 | 6890178 ~ 6890405 (-) | True | G78563 |
| TU105994 | lncRNA | upstream | 64 | 7362219 ~ 7362436 (-) | True | G78643 |
| TU106303 | lncRNA | upstream | 377861 | 7740016 ~ 7740593 (-) | True | G78861 |
| TU106295 | lncRNA | upstream | 383148 | 7745303 ~ 7746850 (-) | True | G78859 |
| TU106296 | lncRNA | upstream | 396433 | 7758588 ~ 7767327 (-) | False | G78859 |
| TU106314 | lncRNA | upstream | 400812 | 7762967 ~ 7764864 (-) | True | G78871 |
| XM_007257593.3 | mRNA | downstream | 23995 | 7316546 ~ 7337779 (-) | True | iars2 |
| XM_007257594.3 | mRNA | downstream | 23996 | 7316546 ~ 7337778 (-) | False | iars2 |
| XM_022672648.1 | mRNA | downstream | 141021 | 7198909 ~ 7220753 (-) | True | LOC111193177 |
| XM_022672649.1 | mRNA | downstream | 141021 | 7199332 ~ 7220753 (-) | False | LOC111193177 |
| XM_022672647.1 | mRNA | downstream | 168184 | 7091045 ~ 7193590 (-) | False | LOC103026718 |
| XM_007257588.3 | mRNA | upstream | 28381 | 7390536 ~ 7410350 (-) | True | qrsl1 |
| XM_022672654.1 | mRNA | upstream | 28381 | 7390536 ~ 7405973 (-) | False | qrsl1 |
| XM_022672652.1 | mRNA | upstream | 72462 | 7434617 ~ 7545317 (-) | True | crybg1 |
| XM_022672653.1 | mRNA | upstream | 72462 | 7434617 ~ 7483931 (-) | False | crybg1 |
| XM_022672655.1 | mRNA | upstream | 185297 | 7547452 ~ 7589335 (-) | True | clic4 |
| XR_002650306.1 | other | downstream | 83990 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| TU105931 | other | downstream | 140920 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| TU105554 | other | downstream | 2175416 | 5184792 ~ 5186358 (-) | True | G78297 |
| TU105293 | other | downstream | 3155390 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105210 | other | downstream | 3521204 | 3834562 ~ 3840570 (-) | True | G78023 |
| XR_002650309.1 | other | upstream | 1270720 | 8632875 ~ 8641745 (-) | False | spdya |
| TU106477 | other | upstream | 1288782 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650312.1 | other | upstream | 2475823 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
| XR_002650315.1 | other | upstream | 2672531 | 10034686 ~ 10071884 (-) | False | LOC103027354 |
| TU107210 | other | upstream | 3566485 | 10928640 ~ 10929596 (-) | True | G79582 |
