Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU106342 |
| length | 616 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G78890 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 8428518 ~ 8432284 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650307.1 | lncRNA | downstream | 13408 | 8379489 ~ 8415110 (-) | True | LOC111193182 |
| TU106399 | lncRNA | downstream | 134433 | 8292262 ~ 8294085 (-) | True | G78940 |
| TU106367 | lncRNA | downstream | 277242 | 8150455 ~ 8151276 (-) | True | G78911 |
| TU106343 | lncRNA | downstream | 388326 | 7981970 ~ 8040192 (-) | True | G78891 |
| TU106339 | lncRNA | downstream | 447095 | 7977800 ~ 7981423 (-) | True | G78889 |
| TU106431 | lncRNA | upstream | 44113 | 8476397 ~ 8510794 (-) | False | LOC111193183 |
| TU106430 | lncRNA | upstream | 74293 | 8506577 ~ 8510794 (-) | True | LOC111193183 |
| TU106447 | lncRNA | upstream | 103652 | 8535936 ~ 8537624 (-) | True | G78978 |
| TU106453 | lncRNA | upstream | 129814 | 8562098 ~ 8563527 (-) | True | G78983 |
| TU106456 | lncRNA | upstream | 148299 | 8580583 ~ 8580826 (-) | True | G78986 |
| XM_022672470.1 | mRNA | downstream | 206200 | 8008547 ~ 8222318 (-) | True | dlgap2 |
| XM_007257572.2 | mRNA | downstream | 431699 | 7986161 ~ 7996819 (-) | True | cln8 |
| XM_022672469.1 | mRNA | downstream | 460840 | 7931051 ~ 7967678 (-) | True | LOC111193126 |
| XM_022672663.1 | mRNA | downstream | 502559 | 7825663 ~ 7925959 (-) | True | arhgef10 |
| XM_007257573.2 | mRNA | downstream | 608316 | 7811870 ~ 7820202 (-) | True | kbtbd11 |
| XM_022672666.1 | mRNA | upstream | 78406 | 8510690 ~ 8517648 (-) | False | LOC111193183 |
| XM_007257568.3 | mRNA | upstream | 87791 | 8520075 ~ 8527936 (-) | False | zbtb8a |
| XM_007257569.3 | mRNA | upstream | 87791 | 8520075 ~ 8527661 (-) | True | zbtb8a |
| XM_022672668.1 | mRNA | upstream | 97553 | 8529837 ~ 8549961 (-) | False | gale |
| XM_022672667.1 | mRNA | upstream | 97553 | 8529837 ~ 8549961 (-) | True | gale |
| XR_002650306.1 | other | downstream | 1150734 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| TU105931 | other | downstream | 1207664 | 7199349 ~ 7220854 (-) | False | LOC111193177 |
| TU105554 | other | downstream | 3242160 | 5184792 ~ 5186358 (-) | True | G78297 |
| TU105293 | other | downstream | 4222134 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105210 | other | downstream | 4587948 | 3834562 ~ 3840570 (-) | True | G78023 |
| XR_002650309.1 | other | upstream | 200591 | 8632875 ~ 8641745 (-) | False | spdya |
| TU106477 | other | upstream | 218653 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650312.1 | other | upstream | 1405694 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
| XR_002650315.1 | other | upstream | 1602402 | 10034686 ~ 10071884 (-) | False | LOC103027354 |
| TU107210 | other | upstream | 2496356 | 10928640 ~ 10929596 (-) | True | G79582 |
