Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1838 |
| length | 254 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 4 |
| gene id | G1353 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 4275838 ~ 4276794 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0015672 | monovalent inorganic cation transport | biological_process |
| GO:0030001 | metal ion transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1831 | lncRNA | downstream | 6476 | 4267001 ~ 4269362 (-) | False | LOC111193794 |
| TU1793 | lncRNA | downstream | 113965 | 4161479 ~ 4161873 (-) | True | G1324 |
| TU1792 | lncRNA | downstream | 118998 | 4156601 ~ 4156840 (-) | True | G1323 |
| TU1759 | lncRNA | downstream | 194055 | 4079537 ~ 4081783 (-) | True | G1301 |
| TU1740 | lncRNA | downstream | 265958 | 4007103 ~ 4009880 (-) | True | G1290 |
| TU1848 | lncRNA | upstream | 78079 | 4354873 ~ 4355132 (-) | True | G1363 |
| TU1863 | lncRNA | upstream | 103804 | 4380598 ~ 4381126 (-) | True | G1374 |
| TU1885 | lncRNA | upstream | 369987 | 4646781 ~ 4655868 (-) | True | G1385 |
| TU1899 | lncRNA | upstream | 406440 | 4683234 ~ 4683540 (-) | True | G1399 |
| TU1914 | lncRNA | upstream | 428793 | 4705587 ~ 4705946 (-) | True | G1414 |
| XM_022675881.1 | mRNA | downstream | 3868 | 4269319 ~ 4271970 (-) | True | LOC111193794 |
| XM_022675712.1 | mRNA | downstream | 38393 | 4220875 ~ 4237445 (-) | False | LOC111193765 |
| XM_022675733.1 | mRNA | downstream | 41069 | 4220875 ~ 4234769 (-) | True | LOC111193765 |
| XM_022675781.1 | mRNA | downstream | 54922 | 4214015 ~ 4220916 (-) | True | LOC103027148 |
| XM_022671270.1 | mRNA | downstream | 68315 | 4149693 ~ 4207523 (-) | True | dnhd1 |
| XM_022675831.1 | mRNA | upstream | 115 | 4276909 ~ 4321340 (-) | True | LOC111193783 |
| XM_007237711.3 | mRNA | upstream | 58054 | 4334848 ~ 4338794 (-) | True | LOC103028190 |
| XM_022671114.1 | mRNA | upstream | 110453 | 4387247 ~ 4388980 (-) | True | LOC111192761 |
| XM_022671117.1 | mRNA | upstream | 115152 | 4391946 ~ 4393659 (-) | True | LOC111192762 |
| XM_022676186.1 | mRNA | upstream | 458244 | 4735038 ~ 4747924 (-) | False | LOC107197778 |
| TU1773 | other | downstream | 174272 | 4099765 ~ 4101566 (-) | True | G1308 |
| TU1713 | other | downstream | 366175 | 3900883 ~ 3909663 (-) | False | wdfy1 |
| TU1203 | other | downstream | 1307361 | 2910754 ~ 2968477 (-) | True | LOC103032016 |
| TU1089 | other | downstream | 1721151 | 2550216 ~ 2554687 (-) | False | G807 |
| XR_454399.3 | other | downstream | 1841437 | 2423713 ~ 2434401 (-) | True | znf414 |
| TU1837 | other | upstream | 549 | 4277343 ~ 4304762 (-) | False | LOC111193783 |
| TU2412 | other | upstream | 1434542 | 5711336 ~ 5712686 (-) | False | LOC103031123 |
| TU2413 | other | upstream | 1435948 | 5712742 ~ 5721108 (-) | False | LOC103031123 |
| TU3335 | other | upstream | 5472138 | 9748932 ~ 9755744 (-) | False | hspa13 |
| XR_002651630.1 | other | upstream | 5970671 | 10247465 ~ 10359666 (-) | False | rap1gap2 |
