Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3780 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G2897 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 11161827 ~ 11162073 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3766 | lncRNA | downstream | 43864 | 11116380 ~ 11117963 (-) | True | G2888 |
| TU3759 | lncRNA | downstream | 49021 | 11092170 ~ 11112806 (-) | True | G2881 |
| TU3735 | lncRNA | downstream | 90588 | 11071033 ~ 11071239 (-) | True | G2865 |
| TU3724 | lncRNA | downstream | 163747 | 10997852 ~ 10998080 (-) | True | G2857 |
| TU3703 | lncRNA | downstream | 377687 | 10783804 ~ 10784140 (-) | True | G2837 |
| TU3933 | lncRNA | upstream | 262561 | 11424634 ~ 11425258 (-) | True | G3010 |
| TU3940 | lncRNA | upstream | 300587 | 11462660 ~ 11466549 (-) | True | G3013 |
| TU3991 | lncRNA | upstream | 569442 | 11731515 ~ 11754015 (-) | True | G3055 |
| TU3999 | lncRNA | upstream | 593222 | 11755295 ~ 11760809 (-) | True | G3062 |
| TU4000 | lncRNA | upstream | 597135 | 11759208 ~ 11759827 (-) | False | G3062 |
| XM_022683325.1 | mRNA | downstream | 26525 | 11120807 ~ 11135302 (-) | True | foxn1 |
| XM_022683219.1 | mRNA | downstream | 77944 | 11080848 ~ 11083883 (-) | True | LOC103042223 |
| XM_015602259.2 | mRNA | downstream | 77953 | 11080848 ~ 11083874 (-) | False | LOC103042223 |
| XM_022683158.1 | mRNA | downstream | 85462 | 11072398 ~ 11076365 (-) | True | LOC103043674 |
| XM_022683090.1 | mRNA | downstream | 404941 | 10753104 ~ 10756886 (-) | False | LOC111195508 |
| XM_022683451.1 | mRNA | upstream | 119136 | 11281209 ~ 11293882 (-) | False | sarm1 |
| XM_007232334.3 | mRNA | upstream | 119136 | 11281209 ~ 11293882 (-) | True | sarm1 |
| XM_022683738.1 | mRNA | upstream | 142517 | 11304590 ~ 11308672 (-) | False | lrrc72 |
| XM_022683647.1 | mRNA | upstream | 142517 | 11304590 ~ 11308664 (-) | True | lrrc72 |
| XM_015601043.2 | mRNA | upstream | 142517 | 11304590 ~ 11308663 (-) | False | lrrc72 |
| TU3680 | other | downstream | 477362 | 10662422 ~ 10684465 (-) | False | LOC103025442 |
| TU3640 | other | downstream | 579080 | 10582289 ~ 10582747 (-) | True | G2783 |
| XR_002651630.1 | other | downstream | 802161 | 10247465 ~ 10359666 (-) | False | rap1gap2 |
| TU3335 | other | downstream | 1406083 | 9748932 ~ 9755744 (-) | False | hspa13 |
| TU2413 | other | downstream | 5440719 | 5712742 ~ 5721108 (-) | False | LOC103031123 |
| XR_002651739.1 | other | upstream | 119136 | 11281209 ~ 11293882 (-) | False | sarm1 |
| TU4317 | other | upstream | 1578071 | 12740144 ~ 12758513 (-) | True | G3297 |
| TU4408 | other | upstream | 1968139 | 13130212 ~ 13135641 (-) | True | LOC111197384 |
| XR_002648804.1 | other | upstream | 2962709 | 14124782 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648814.1 | other | upstream | 2963055 | 14125128 ~ 14132536 (-) | False | LOC111189390 |
