Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4104 |
| length | 1279 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G3150 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 11887968 ~ 11889246 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0010035 | response to inorganic substance | biological_process |
| GO:0010038 | response to metal ion | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4103 | lncRNA | downstream | 3269 | 11884305 ~ 11884699 (-) | True | G3149 |
| TU4024 | lncRNA | downstream | 45783 | 11841199 ~ 11842185 (-) | True | G3083 |
| TU3989 | lncRNA | downstream | 90484 | 11791059 ~ 11797484 (-) | True | G3053 |
| TU4006 | lncRNA | downstream | 124984 | 11762634 ~ 11762984 (-) | True | G3067 |
| TU4005 | lncRNA | downstream | 125393 | 11762369 ~ 11762575 (-) | True | G3066 |
| TU4148 | lncRNA | upstream | 17687 | 11906933 ~ 11909013 (-) | True | G3163 |
| TU4146 | lncRNA | upstream | 28628 | 11917874 ~ 11918345 (-) | True | G3161 |
| TU4117 | lncRNA | upstream | 39608 | 11928854 ~ 11932452 (-) | False | LOC111192956 |
| TU4140 | lncRNA | upstream | 39608 | 11928854 ~ 11933613 (-) | False | LOC111192956 |
| TU4122 | lncRNA | upstream | 43757 | 11933003 ~ 11937230 (-) | False | LOC111192956 |
| XM_007232341.3 | mRNA | downstream | 100826 | 11777578 ~ 11787142 (-) | True | tmem106b |
| XM_007232357.3 | mRNA | downstream | 110665 | 11767555 ~ 11777303 (-) | True | LOC103030898 |
| XM_007232340.3 | mRNA | downstream | 161770 | 11714121 ~ 11726198 (-) | True | LOC103024995 |
| XM_007232339.2 | mRNA | downstream | 174697 | 11709625 ~ 11713271 (-) | True | arl4a |
| XM_022683783.1 | mRNA | downstream | 579310 | 11304590 ~ 11308658 (-) | False | lrrc72 |
| XM_022671366.1 | mRNA | upstream | 34756 | 11924002 ~ 11940744 (-) | True | LOC111192956 |
| XM_007236706.3 | mRNA | upstream | 57224 | 11946470 ~ 11976692 (-) | True | LOC103031554 |
| XM_007236705.3 | mRNA | upstream | 128769 | 12018015 ~ 12214741 (-) | True | gbe1 |
| XM_007234502.2 | mRNA | upstream | 726408 | 12615654 ~ 12626454 (-) | False | LOC103022193 |
| XM_007234501.2 | mRNA | upstream | 726408 | 12615654 ~ 12626454 (-) | True | LOC103022193 |
| XR_002651739.1 | other | downstream | 594086 | 11281209 ~ 11293882 (-) | False | sarm1 |
| TU3680 | other | downstream | 1203503 | 10662422 ~ 10684465 (-) | False | LOC103025442 |
| TU3640 | other | downstream | 1305221 | 10582289 ~ 10582747 (-) | True | G2783 |
| XR_002651630.1 | other | downstream | 1528302 | 10247465 ~ 10359666 (-) | False | rap1gap2 |
| TU3335 | other | downstream | 2132224 | 9748932 ~ 9755744 (-) | False | hspa13 |
| TU4317 | other | upstream | 850898 | 12740144 ~ 12758513 (-) | True | G3297 |
| TU4408 | other | upstream | 1240966 | 13130212 ~ 13135641 (-) | True | LOC111197384 |
| XR_002648804.1 | other | upstream | 2235536 | 14124782 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648814.1 | other | upstream | 2235882 | 14125128 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648788.1 | other | upstream | 2238123 | 14127369 ~ 14132536 (-) | False | LOC111189390 |
