Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4371 |
| length | 537 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G3337 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 13034489 ~ 13035079 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4353 | lncRNA | downstream | 34849 | 12999136 ~ 12999640 (-) | True | G3324 |
| TU4315 | lncRNA | downstream | 271888 | 12759262 ~ 12762601 (-) | False | sgcg |
| TU4316 | lncRNA | downstream | 271888 | 12759262 ~ 12762601 (-) | False | sgcg |
| TU4322 | lncRNA | downstream | 313870 | 12716103 ~ 12720619 (-) | True | G3301 |
| TU4277 | lncRNA | downstream | 456078 | 12576767 ~ 12578411 (-) | True | G3268 |
| TU4400 | lncRNA | upstream | 60399 | 13095478 ~ 13096194 (-) | True | G3354 |
| XR_002652423.1 | lncRNA | upstream | 95400 | 13130479 ~ 13131502 (-) | False | LOC111197384 |
| TU4402 | lncRNA | upstream | 112059 | 13147138 ~ 13151004 (-) | False | G3356 |
| TU4403 | lncRNA | upstream | 112059 | 13147138 ~ 13151004 (-) | True | G3356 |
| XR_002652513.1 | lncRNA | upstream | 346175 | 13381254 ~ 13384947 (-) | True | LOC111197623 |
| XM_007234507.3 | mRNA | downstream | 253324 | 12759066 ~ 12781165 (-) | True | sgcg |
| XM_015601632.2 | mRNA | downstream | 328380 | 12668035 ~ 12706109 (-) | False | LOC103022701 |
| XM_015601631.2 | mRNA | downstream | 328381 | 12668035 ~ 12706108 (-) | False | LOC103022701 |
| XM_007234503.3 | mRNA | downstream | 328382 | 12668035 ~ 12706107 (-) | True | LOC103022701 |
| XM_007234501.2 | mRNA | downstream | 408035 | 12615654 ~ 12626454 (-) | True | LOC103022193 |
| XM_007260899.3 | mRNA | upstream | 117940 | 13153019 ~ 13165105 (-) | True | ap2s1 |
| XM_007260895.3 | mRNA | upstream | 424621 | 13459700 ~ 13467692 (-) | True | tmem160 |
| XM_007260894.3 | mRNA | upstream | 449095 | 13484174 ~ 13513361 (-) | True | LOC103047661 |
| XM_022687165.1 | mRNA | upstream | 449095 | 13484174 ~ 13512450 (-) | False | LOC103047661 |
| XM_007260893.2 | mRNA | upstream | 491340 | 13526419 ~ 13541264 (-) | True | LOC103047347 |
| TU4317 | other | downstream | 275976 | 12740144 ~ 12758513 (-) | True | G3297 |
| XR_002651739.1 | other | downstream | 1740607 | 11281209 ~ 11293882 (-) | False | sarm1 |
| TU3680 | other | downstream | 2350024 | 10662422 ~ 10684465 (-) | False | LOC103025442 |
| TU3640 | other | downstream | 2451742 | 10582289 ~ 10582747 (-) | True | G2783 |
| XR_002651630.1 | other | downstream | 2674823 | 10247465 ~ 10359666 (-) | False | rap1gap2 |
| TU4408 | other | upstream | 95133 | 13130212 ~ 13135641 (-) | True | LOC111197384 |
| XR_002648804.1 | other | upstream | 1089703 | 14124782 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648814.1 | other | upstream | 1090049 | 14125128 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648788.1 | other | upstream | 1092290 | 14127369 ~ 14132536 (-) | False | LOC111189390 |
| XR_002648822.1 | other | upstream | 1092358 | 14127437 ~ 14132536 (-) | False | LOC111189390 |
