RNA id: XM_015604753.2


Basic Information

Item Value
RNA id XM_015604753.2
length 3120
RNA type mRNA
GC content 0.48
exon number 9
gene id olfml2b
representative False

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 3297813 ~ 3316021 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TTCAGATCTCCATTCATCACTGGCCATCCCAGCCTCCAGCTCACGCTCCTGACTCCACACAGACCAACCCTCTGATTTAATCTCATTAATTAGAGTGGATAATTAATGAATACATGAGGAAATCCAAGACCTAAGAATAGTATTTAATTAATCTCATCTACAAAAGTTTCTGACTGTCCAGTGAAGGATCTTCTACCAGCTACCAGTGTGTCTGGATTCCTGGAGCTCCAGCATGATGCCCTCAAGCCTGTTGCTTTACTGGTTCTGCTGCTGGACTCTTTACTCAGCACCAGTGGCCTGGACCAGTGCAGTGGACCAGCAGATCATCCCTGAAGAACTTAACGGGAACACTGCTGCAGTTCTGGAGGATGAATTGGATAATCAGGAGAATATTTTAACTCAGCTCTTAGGGGACTATGATAAGGTGAAGACGGTGTCGGAGGGGCCGGACTGCCGCTGTAAGTGTGTGGTCAGGCCGCTGAGCCGGACTGCCTGCAGGCGTATCGAGGAGGGGGACGGCAGGGCGGAGGATTTTTACACCGTGGAGACGGTGACGGGGGGACCCAACTGCAAAAAGTGTGCATGCATCGCCCCGCCCTCAGCCCTGAACCCCTGCGAGGGAGATTACAGGTTCAAAAAGCTCCAGGAGGCGGGGCAAACTGATATCAAGCTCTCCACTATAATGGATCTACTGGAGGGAGCTTTCTATGGGATGGATCTGTTAAAGCTGCACTCAGTGACCACCAAGCTTCTGGAGCGCGTGGACAACATGGAGAAGACGTTCTCCATAAACATGACAAAGGAACGAGGGAGTGTGAAAGGAGAGAAAGGTCAGGGGAAAGGGTCGCGAGCCCAGCAACGCCTGGAGAAGAAAAGACGCCTGAGCGAGTTGGAACCTTCTCTGCAGAAGAAAGTGGCGGCAGCTTTCTCTAACTCTGAGAGGAAGTATGAGGAGAAGTTTGTGGGGGTTCAGGGCTCCGGCAGACCCCTGCTGAAGAGGAGCCACTCTGAGGGCCCTGAGGAGCCGAAACCTGCGAAGACTAAAGTGGGACAAAATGGGATGAGCATCAGGAGTGTGACCTTCTACAAGGCTGATACTGAAGAGGAAGAGGATACAGGGGAACAGAATGCGACGGAAGAAGTCCTGAGCGGAGATGGTTCAGTGGACTTAGTAATAGAAGACCAGATCCCCAAGCAGCAGCAGACCGCCCCCACTGCGGCCACAGGCCCTTTAACCACAGCCACCGCGGCTCCAGAACCAAGACCCAATACCAGCTCTCAGATCGTCAGCAACTCAGCTGATCCTCTGGACAGACCGACCACCACAAATCTGCTCACCGTCACaaaactgcagcagcagaaaACCCAGGAGACGACTTCCACCAGCTCCACAGCGCCGGCCGCCCACACCACCTCAACCACAGTCACCACACAGCCGGCGGCCACCAACAAAGCACCATCCATCACCGCTCCATCCCAAGCAACAAAACCAGCACCACCACCCAACTCCAACTCTAACTCAACAGATGCTGAGAAAAAGCACAAATCCAGACTCACCTGGGACGAAGGACCTGCTGAAACAACCACAGTAACCCCAAAGAACACCGGTGTTTGTAAGGATACGTTGTCCACTATCAGCGATCCTgtaacacacaacacatacGGTCGTAATGAAGGAGCATGGATGAAGGATCCGAAAGGAAACGGCAACGTCATTTATGTCACAAACAACTACTTCGGCAGTAATCTTCTGGAATTCAGAGATATGGATACGTTCAAACAAGggCGTTTAACAAACTCCTACAAGCTCCCGTATAACTGGATCGGAACGGGTCATGTGGTCTACAACGGAGCTTTCTACTACAACCGGGCCTTTTCTCGCGACATCATCAAATTTGACCTGCGTCTGCGGTACGTAGCAGCCTGGACCACCCTGCACGACACTCTGttcgaggaggaggaggagtcccCCTGGAAGTGGAGAGGACACTCGGATATCGACTTTGCTGTGGATGAAAGCGGGTTGTGGATGGTGTACCCGGCTCTCGACGAGGAGGGCATATACCAGGAGGTGATCATCCTGAGCAAGATGAACCCCTCAGACCTGCAGAAGGAGAACTCCTGGAGAACGGGCCTGAGGAGAAATCGCTACGGCAACTGCTTCCTGATCTGCGGCGTCCTGTACGCCGTGGACAGTTACGACCGCATGCACGCCAACATCTCCTACGCGTTCGACACGCATACCCACACGCAGATGGCGCCGCAGCTGCCCTTCATAAACAACTACACCTACACCACCCAGATCGACTACAACCCCAAAGACCGCAGGCTGTACGCCTGGGACAACGGCCACCAGGTGACCTACGACGTGATCTTCGCTTATTAATTACTGTACGGGGTTTATAGTATCAGATTAGTAAAATACTGCTCAGCACTTTTTGTATAAAGTATGGATTTAAGGAGTCTCAGTGGATTGTGGATCAGTCTACGTCTTTAGTATGTTTTCTATGATTaatatgtcaatatttttatgaatttaATGTTCAGTGTTTGTCTGGTTGTGTGAAGTGcatgtctgtctgccctgctgaaaaaaacagCCAGTCCAGCTTAAGATTAtaaagctggttgaccagcgtTATCTATTCTTGTTTAAAGCTAAGCGGGTCAACCAGCTTCTGTAGATAAAGAGAATCCatttaaacaaatgaaacaaaaatattagcttttttatttattgagacAAATGATCCCATGTTACATATATGTGAGTggtaaaagtatgtgaaacACTAGGATTAGCAGAAAATTTGCTGAAAGGTGATATTAGAGTCAGGTGTTTTCAACAAATTGGATGATAATCAGGTgtgggtggagtgggtggagtttgttttatttaaagaacaggtATCATATTTCATATGTTTGTGAAAGTGTATTATGGTTTGAACAAAGGAGATTTTTGAGGACCTCAGAAAAAGAGTTGTTGATGCTAATCAGGCTGGAATAGGTTACAAAATCATCTCTAAAGAGTTTGGGGTACCACTttataagactacctttataaagggtttataaatggtttacaattagtttattaatggttaataactaggttgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1371 lncRNA downstream 167 3296240 ~ 3297646 (-) True G1013
TU1375 lncRNA downstream 3031 3294576 ~ 3294782 (-) True G1017
TU1374 lncRNA downstream 7895 3289505 ~ 3289918 (-) True G1016
TU1343 lncRNA downstream 109831 3187503 ~ 3187982 (-) True G990
TU1318 lncRNA downstream 148601 3092945 ~ 3149212 (-) True G977
TU1612 lncRNA upstream 52782 3368803 ~ 3373615 (-) True G1211
TU1616 lncRNA upstream 69352 3385373 ~ 3386231 (-) True G1214
TU1621 lncRNA upstream 97664 3413685 ~ 3415112 (-) False LOC103029371
TU1628 lncRNA upstream 158168 3474189 ~ 3474864 (-) True G1224
TU1670 lncRNA upstream 262208 3578229 ~ 3585540 (-) True G1238
XM_022673821.1 mRNA downstream 80792 3189007 ~ 3217021 (-) True LOC103033918
XM_022673759.1 mRNA downstream 118219 3163711 ~ 3179594 (-) False LOC111193343
XM_022673733.1 mRNA downstream 118219 3163711 ~ 3179594 (-) True LOC111193343
XM_007245058.3 mRNA downstream 183044 3099846 ~ 3114769 (-) True c1h1orf27
XM_022673448.1 mRNA downstream 260979 2986333 ~ 3036834 (-) True LOC103034573
XM_007245151.2 mRNA upstream 60589 3376610 ~ 3383122 (-) True LOC103033290
XM_022671241.1 mRNA upstream 78183 3394204 ~ 3445386 (-) True LOC103029371
XM_022674427.1 mRNA upstream 174851 3490872 ~ 3503293 (-) True LOC103028436
XM_022674557.1 mRNA upstream 200603 3516624 ~ 3554189 (-) False LOC103032346
XM_022674501.1 mRNA upstream 200603 3516624 ~ 3554178 (-) True LOC103032346
TU1203 other downstream 329336 2910754 ~ 2968477 (-) True LOC103032016
TU1089 other downstream 743126 2550216 ~ 2554687 (-) False G807
XR_454399.3 other downstream 863412 2423713 ~ 2434401 (-) True znf414
TU795 other downstream 1424686 1864515 ~ 1873127 (-) True yipf1
XR_002648446.1 other downstream 2441653 855579 ~ 856160 (-) True LOC111197534
TU1713 other upstream 584862 3900883 ~ 3909663 (-) False wdfy1
TU1773 other upstream 783744 4099765 ~ 4101566 (-) True G1308
TU1837 other upstream 961322 4277343 ~ 4304762 (-) False LOC111193783
TU2412 other upstream 2395315 5711336 ~ 5712686 (-) False LOC103031123
TU2413 other upstream 2396721 5712742 ~ 5721108 (-) False LOC103031123

Expression Profile