Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_02318724_02321379.mRNA |
| length | 1017 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | CI01000001_02318724_02321379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 2318724 ~ 2321379 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| id | description |
|---|---|
| K17444 | HOXC10; homrobox protein Hox-C10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16010 | lncRNA | downstream | 163841 | 2154382 ~ 2154883 (-) | True | G14304 |
| TU16007 | lncRNA | downstream | 167268 | 2151126 ~ 2151456 (-) | True | G14301 |
| TU16006 | lncRNA | downstream | 169787 | 2148714 ~ 2148937 (-) | True | G14300 |
| TU16003 | lncRNA | downstream | 175359 | 2143141 ~ 2143365 (-) | True | G14297 |
| TU15999 | lncRNA | downstream | 200158 | 2118355 ~ 2118566 (-) | True | G14293 |
| TU16042 | lncRNA | upstream | 46479 | 2367858 ~ 2368107 (-) | True | G14335 |
| TU15892 | lncRNA | upstream | 76776 | 2398155 ~ 2398918 (-) | True | G14194 |
| TU16053 | lncRNA | upstream | 81798 | 2403177 ~ 2403748 (-) | True | G14344 |
| TU15912 | lncRNA | upstream | 148816 | 2470195 ~ 2473589 (-) | True | G14214 |
| TU16167 | lncRNA | upstream | 302928 | 2624307 ~ 2624520 (-) | True | G14445 |
| CI01000001_02305032_02310500.mRNA | mRNA | downstream | 7642 | 2305002 ~ 2311082 (-) | True | CI01000001_02305032_02310500 |
| CI01000001_02301569_02304543.mRNA | mRNA | downstream | 14152 | 2301135 ~ 2304572 (-) | True | CI01000001_02301569_02304543 |
| CI01000001_02289890_02291109.mRNA | mRNA | downstream | 26980 | 2289090 ~ 2291744 (-) | True | CI01000001_02289890_02291109 |
| CI01000001_02286306_02287855.mRNA | mRNA | downstream | 30722 | 2286263 ~ 2288002 (-) | True | CI01000001_02286306_02287855 |
| CI01000001_02274875_02276207.mRNA | mRNA | downstream | 41955 | 2274292 ~ 2276769 (-) | True | CI01000001_02274875_02276207 |
| CI01000001_02327669_02329891.mRNA | mRNA | upstream | 6290 | 2327669 ~ 2329891 (-) | True | CI01000001_02327669_02329891 |
| CI01000001_02339253_02340813.mRNA | mRNA | upstream | 17874 | 2339253 ~ 2340813 (-) | True | CI01000001_02339253_02340813 |
| CI01000001_02343039_02351117.mRNA | mRNA | upstream | 20863 | 2342242 ~ 2351117 (-) | True | CI01000001_02343039_02351117 |
| CI01000001_02416674_02429967.mRNA | mRNA | upstream | 94471 | 2415850 ~ 2430607 (-) | True | CI01000001_02416674_02429967 |
| CI01000001_02510977_02523145.mRNA | mRNA | upstream | 189455 | 2510834 ~ 2523145 (-) | True | CI01000001_02510977_02523145 |
| TU15886 | other | downstream | 21512 | 2262344 ~ 2297212 (-) | True | G14188 |
| TU15926 | other | downstream | 262246 | 2055974 ~ 2056478 (-) | True | G14228 |
| TU15917 | other | downstream | 323826 | 1994210 ~ 1994898 (-) | True | G14219 |
| TU15779 | other | downstream | 551266 | 1763669 ~ 1767458 (-) | False | G14104 |
| TU14337 | other | downstream | 1921591 | 367242 ~ 397133 (-) | True | G12898 |
| TU17347 | other | upstream | 2070935 | 4392314 ~ 4399515 (-) | True | CI01000001_04395469_04399381 |
| TU17350 | other | upstream | 2154905 | 4476800 ~ 4478145 (-) | True | G15528 |
| TU17475 | other | upstream | 2247703 | 4569082 ~ 4618357 (-) | True | G15639 |
| TU17472 | other | upstream | 2248098 | 4569477 ~ 4618357 (-) | False | G15639 |
| TU17476 | other | upstream | 2292796 | 4614175 ~ 4618357 (-) | True | G15639 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043329 | True | 1242 | mRNA | 0.47 | 2 | NC_007134.7 | 36083617 ~ 36086594 (+) |
