RNA id: TU14362



Basic Information


Item Value
RNA id TU14362
length 228
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G12921
representative True

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 282555 ~ 282782 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGAACCATTGTTTCTTTATACTGTGTGTGGTTACCTGGATGATCTATGGCTGTTTTTTTGTTGTGTGATGGTTGTTCATGAGTCTCTTGTTTGTTCTGATCAGTTAAACTGAGCTCTGTTCTTCAGAAAAAATCTCCAGGTCCCAAAAATTCTTCAGTTTTCCACCATCTTTTGCATATTTGAACCCTTTCCAGCAGTGACTGAATGATTTTGAGATCCATCTTTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14361 lncRNA downstream 4266 278044 ~ 278289 (-) True G12920
TU14311 lncRNA downstream 70309 211309 ~ 212246 (-) True G12873
TU14318 lncRNA downstream 73197 209149 ~ 209358 (-) True G12880
TU14316 lncRNA downstream 78849 203492 ~ 203706 (-) True G12878
TU14315 lncRNA downstream 79338 202998 ~ 203217 (-) True G12877
TU14374 lncRNA upstream 52943 335725 ~ 336033 (-) True G12933
TU14335 lncRNA upstream 76089 358871 ~ 359739 (-) True G12896
TU14386 lncRNA upstream 122549 405331 ~ 406159 (-) True G12945
TU14387 lncRNA upstream 130902 413684 ~ 413948 (-) True G12946
TU14396 lncRNA upstream 222067 504849 ~ 505048 (-) True G12955
CI01000001_00238241_00249437.mRNA mRNA downstream 33118 238241 ~ 249437 (-) False CI01000001_00238241_00249437
CI01000001_00222940_00227735.mRNA mRNA downstream 54548 222800 ~ 228007 (-) True CI01000001_00222940_00227735
CI01000001_00218182_00220017.mRNA mRNA downstream 62439 217657 ~ 220116 (-) True CI01000001_00218182_00220017
CI01000001_00192545_00195828.mRNA mRNA downstream 85724 191931 ~ 196831 (-) True CI01000001_00192545_00195828
CI01000001_00124107_00131285.mRNA mRNA downstream 151175 123059 ~ 131380 (-) False CI01000001_00124107_00131285
CI01000001_00305883_00333574.mRNA mRNA upstream 22709 305491 ~ 333798 (-) True CI01000001_00305883_00333574
CI01000001_00362143_00378213.mRNA mRNA upstream 78832 361614 ~ 378213 (-) False CI01000001_00362143_00378213
CI01000001_00445369_00466166.mRNA mRNA upstream 162458 445240 ~ 466897 (-) True CI01000001_00445369_00466166
CI01000001_00493196_00498517.mRNA mRNA upstream 209983 492765 ~ 498517 (-) True CI01000001_00493196_00498517
CI01000001_00500347_00500698.mRNA mRNA upstream 217301 500083 ~ 500698 (-) True CI01000001_00500347_00500698
TU14333 other downstream 25038 257372 ~ 257517 (-) True G12894
TU14263 other downstream 147630 129502 ~ 134925 (-) True G12848
TU14286 other downstream 157098 122814 ~ 125457 (-) False CI01000001_00124107_00131285
TU14337 other upstream 84460 367242 ~ 397133 (-) True G12898
TU15779 other upstream 1480887 1763669 ~ 1767458 (-) False G14104
TU15917 other upstream 1711428 1994210 ~ 1994898 (-) True G14219
TU15926 other upstream 1773192 2055974 ~ 2056478 (-) True G14228
TU15886 other upstream 1976607 2262344 ~ 2297212 (-) True G14188

Expression Profile