Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_00617015_00621040.mRNA |
| length | 1206 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | CI01000004_00617015_00621040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 617015 ~ 621258 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0015012 | heparan sulfate proteoglycan biosynthetic process | biological_process |
| id | description |
|---|---|
| K02369 | EXTL2; alpha-1,4-N-acetylglucosaminyltransferase EXTL2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27589 | lncRNA | upstream | 97724 | 516877 ~ 519291 (+) | True | G24431 |
| TU27584 | lncRNA | upstream | 105286 | 508882 ~ 511729 (+) | True | G24426 |
| TU27492 | lncRNA | upstream | 190105 | 426709 ~ 426910 (+) | True | G24359 |
| TU27491 | lncRNA | upstream | 192528 | 424271 ~ 424487 (+) | True | G24358 |
| TU27420 | lncRNA | upstream | 238904 | 377110 ~ 378111 (+) | True | G24292 |
| TU27568 | lncRNA | downstream | 100257 | 721515 ~ 722125 (+) | True | G24410 |
| TU27571 | lncRNA | downstream | 101132 | 722390 ~ 722637 (+) | True | G24413 |
| TU27670 | lncRNA | downstream | 129780 | 751038 ~ 753326 (+) | True | G24509 |
| TU27576 | lncRNA | downstream | 135072 | 756330 ~ 756931 (+) | True | G24418 |
| TU27696 | lncRNA | downstream | 180096 | 801354 ~ 802056 (+) | True | G24534 |
| CI01000004_00584081_00605137.mRNA | mRNA | upstream | 11213 | 584081 ~ 605802 (+) | True | CI01000004_00584081_00605137 |
| CI01000004_00544278_00547753.mRNA | mRNA | upstream | 69032 | 542933 ~ 547983 (+) | True | CI01000004_00544278_00547753 |
| CI01000004_00467911_00469949.mRNA | mRNA | upstream | 146932 | 467802 ~ 470083 (+) | False | CI01000004_00467911_00469949 |
| CI01000004_00407881_00409797.mRNA | mRNA | upstream | 206876 | 407881 ~ 410139 (+) | True | CI01000004_00407881_00409797 |
| CI01000004_00318181_00339002.mRNA | mRNA | upstream | 276995 | 317234 ~ 340020 (+) | True | CI01000004_00318181_00339002 |
| CI01000004_00630734_00632040.mRNA | mRNA | downstream | 9371 | 630629 ~ 632205 (+) | True | CI01000004_00630734_00632040 |
| CI01000004_00664431_00666004.mRNA | mRNA | downstream | 43173 | 664431 ~ 667351 (+) | True | CI01000004_00664431_00666004 |
| CI01000004_00711100_00720189.mRNA | mRNA | downstream | 89842 | 711100 ~ 720716 (+) | True | CI01000004_00711100_00720189 |
| CI01000004_01002230_01003932.mRNA | mRNA | downstream | 380760 | 1002018 ~ 1003982 (+) | True | CI01000004_01002230_01003932 |
| CI01000004_01069526_01076799.mRNA | mRNA | downstream | 448268 | 1069526 ~ 1077028 (+) | True | CI01000004_01069526_01076799 |
| TU27514 | other | upstream | 145169 | 467843 ~ 471846 (+) | True | CI01000004_00467911_00469949 |
| TU28378 | other | downstream | 711207 | 1332465 ~ 1333989 (+) | False | CI01000004_01332533_01345585 |
| TU28341 | other | downstream | 720150 | 1347470 ~ 1348174 (+) | True | G25120 |
| TU28416 | other | downstream | 983284 | 1604542 ~ 1616470 (+) | True | G25187 |
| TU28515 | other | downstream | 1242901 | 1864159 ~ 1873358 (+) | True | G25282 |
| TU28564 | other | downstream | 1461799 | 2083057 ~ 2085707 (+) | True | G25329 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031856 | True | 1495 | mRNA | 0.44 | 5 | NC_007113.7 | 7123237 ~ 7131691 (-) |
