Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_01210703_01220270.mRNA |
| length | 1333 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | CI01000004_01210703_01220270 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 1210454 ~ 1220283 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0030148 | sphingolipid biosynthetic process | biological_process |
| id | description |
|---|---|
| K17506 | PPM1L, PP2CE; protein phosphatase 1L |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28296 | lncRNA | upstream | 50024 | 1140627 ~ 1160430 (+) | True | G25076 |
| TU28310 | lncRNA | upstream | 77877 | 1132293 ~ 1132577 (+) | True | G25089 |
| TU28260 | lncRNA | upstream | 103530 | 1106696 ~ 1106924 (+) | True | G25044 |
| TU27688 | lncRNA | upstream | 128920 | 1080811 ~ 1081534 (+) | True | G24526 |
| TU27808 | lncRNA | upstream | 146302 | 1063697 ~ 1064152 (+) | True | G24641 |
| TU28283 | lncRNA | downstream | 11452 | 1231735 ~ 1231938 (+) | True | G25063 |
| TU28351 | lncRNA | downstream | 69939 | 1290222 ~ 1290678 (+) | True | G25129 |
| TU28366 | lncRNA | downstream | 90760 | 1311043 ~ 1311591 (+) | True | G25143 |
| TU28452 | lncRNA | downstream | 224782 | 1445065 ~ 1445396 (+) | True | G25222 |
| TU28431 | lncRNA | downstream | 239050 | 1465948 ~ 1489877 (+) | True | G25201 |
| CI01000004_01167271_01194834.mRNA | mRNA | upstream | 15350 | 1165939 ~ 1195104 (+) | True | CI01000004_01167271_01194834 |
| CI01000004_01113222_01149263.mRNA | mRNA | upstream | 60463 | 1113082 ~ 1149991 (+) | True | CI01000004_01113222_01149263 |
| CI01000004_01094661_01097428.mRNA | mRNA | upstream | 112796 | 1094661 ~ 1097658 (+) | True | CI01000004_01094661_01097428 |
| CI01000004_01069526_01076799.mRNA | mRNA | upstream | 133426 | 1069526 ~ 1077028 (+) | True | CI01000004_01069526_01076799 |
| CI01000004_01002230_01003932.mRNA | mRNA | upstream | 206472 | 1002018 ~ 1003982 (+) | True | CI01000004_01002230_01003932 |
| CI01000004_01228506_01230204.mRNA | mRNA | downstream | 8122 | 1228405 ~ 1230414 (+) | True | CI01000004_01228506_01230204 |
| CI01000004_01237895_01247463.mRNA | mRNA | downstream | 16085 | 1236368 ~ 1247463 (+) | False | CI01000004_01237895_01247463 |
| CI01000004_01263941_01279547.mRNA | mRNA | downstream | 43658 | 1263941 ~ 1279758 (+) | True | CI01000004_01263941_01279547 |
| CI01000004_01302094_01304391.mRNA | mRNA | downstream | 80866 | 1301149 ~ 1304664 (+) | True | CI01000004_01302094_01304391 |
| CI01000004_01305065_01310559.mRNA | mRNA | downstream | 84782 | 1305065 ~ 1310559 (+) | True | CI01000004_01305065_01310559 |
| TU27514 | other | upstream | 738608 | 467843 ~ 471846 (+) | True | CI01000004_00467911_00469949 |
| TU28378 | other | downstream | 112182 | 1332465 ~ 1333989 (+) | False | CI01000004_01332533_01345585 |
| TU28341 | other | downstream | 121125 | 1347470 ~ 1348174 (+) | True | G25120 |
| TU28416 | other | downstream | 384259 | 1604542 ~ 1616470 (+) | True | G25187 |
| TU28515 | other | downstream | 643876 | 1864159 ~ 1873358 (+) | True | G25282 |
| TU28564 | other | downstream | 862774 | 2083057 ~ 2085707 (+) | True | G25329 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031845 | True | 2709 | mRNA | 0.46 | 4 | NC_007113.7 | 6265768 ~ 6292510 (-) |
| bowfin (Amia calva) | AMCG00009322 | True | 495 | mRNA | 0.48 | 2 | CM030126.1 | 33001428 ~ 33004290 (-) |
