Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_02955707_02959931.mRNA |
| length | 1001 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | CI01000004_02955707_02959931 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 2955530 ~ 2959931 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| id | description |
|---|---|
| K15734 | SDR16C5; all-trans-retinol dehydrogenase (NAD+) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29460 | lncRNA | upstream | 3212 | 2951897 ~ 2952318 (+) | True | G26099 |
| TU29448 | lncRNA | upstream | 24973 | 2930142 ~ 2930557 (+) | True | G26090 |
| TU29444 | lncRNA | upstream | 33559 | 2921717 ~ 2921971 (+) | True | G26086 |
| TU29405 | lncRNA | upstream | 92936 | 2860431 ~ 2862594 (+) | True | G26048 |
| TU29403 | lncRNA | upstream | 96605 | 2852798 ~ 2858925 (+) | False | G26046 |
| TU29417 | lncRNA | downstream | 35560 | 2995491 ~ 2997974 (+) | True | G26059 |
| TU29421 | lncRNA | downstream | 109529 | 3069460 ~ 3069786 (+) | True | G26063 |
| TU29489 | lncRNA | downstream | 110071 | 3070002 ~ 3070238 (+) | True | G26128 |
| TU29511 | lncRNA | downstream | 136926 | 3096857 ~ 3097154 (+) | True | G26147 |
| TU29525 | lncRNA | downstream | 222553 | 3182484 ~ 3236444 (+) | True | G26159 |
| CI01000004_02948465_02951235.mRNA | mRNA | upstream | 3787 | 2947216 ~ 2951743 (+) | True | CI01000004_02948465_02951235 |
| CI01000004_02906581_02908320.mRNA | mRNA | upstream | 47210 | 2906479 ~ 2908320 (+) | True | CI01000004_02906581_02908320 |
| CI01000004_02903759_02904287.mRNA | mRNA | upstream | 51206 | 2903759 ~ 2904324 (+) | True | CI01000004_02903759_02904287 |
| CI01000004_02865415_02867952.mRNA | mRNA | upstream | 87161 | 2864853 ~ 2868369 (+) | True | CI01000004_02865415_02867952 |
| CI01000004_02745885_02768971.mRNA | mRNA | upstream | 186395 | 2745885 ~ 2769135 (+) | False | CI01000004_02745885_02768971 |
| CI01000004_03051206_03066124.mRNA | mRNA | downstream | 91275 | 3051206 ~ 3066588 (+) | True | CI01000004_03051206_03066124 |
| CI01000004_03110546_03114901.mRNA | mRNA | downstream | 150615 | 3110546 ~ 3115611 (+) | True | CI01000004_03110546_03114901 |
| CI01000004_03119968_03122260.mRNA | mRNA | downstream | 160037 | 3119968 ~ 3122260 (+) | True | CI01000004_03119968_03122260 |
| CI01000004_03124603_03125975.mRNA | mRNA | downstream | 164672 | 3124603 ~ 3126107 (+) | True | CI01000004_03124603_03125975 |
| CI01000004_03126603_03131458.mRNA | mRNA | downstream | 166563 | 3126494 ~ 3131561 (+) | True | CI01000004_03126603_03131458 |
| TU29335 | other | upstream | 196592 | 2758456 ~ 2758938 (+) | True | CI01000004_02745885_02768971 |
| TU29329 | other | upstream | 218762 | 2736536 ~ 2736768 (+) | True | G25992 |
| TU29214 | other | upstream | 382481 | 2548075 ~ 2573049 (+) | True | G25882 |
| TU28564 | other | upstream | 869823 | 2083057 ~ 2085707 (+) | True | G25329 |
| TU28515 | other | upstream | 1082172 | 1864159 ~ 1873358 (+) | True | G25282 |
| TU29632 | other | downstream | 549086 | 3509017 ~ 3522393 (+) | True | G26245 |
| TU29692 | other | downstream | 591117 | 3551048 ~ 3552446 (+) | True | CI01000004_03550525_03552621 |
| TU31414 | other | downstream | 2412894 | 5372825 ~ 5373803 (+) | False | G27805 |
| TU31416 | other | downstream | 2412894 | 5372825 ~ 5373803 (+) | False | G27805 |
| TU31417 | other | downstream | 2412894 | 5372825 ~ 5373803 (+) | False | G27805 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031979 | True | 1858 | mRNA | 0.42 | 6 | NC_007113.7 | 11483176 ~ 11504778 (-) |
