RNA id: TCONS_00014111



Basic Information


Item Value
RNA id TCONS_00014111
length 1287
RNA type processed_transcript
GC content 0.44
exon number 8
gene id XLOC_007135
representative False

Chromosome Information


Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 9056071 ~ 9066756 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ATTCACTGGCGACCACGAAGAGATGTCTGCATTGCgtcacacacgcgcgcgcacgaGCTGTTTGTTGccaTGTTTCACATTGTGGAGTTTTTGGAAACCCAAGAGGTGGAAGTTGTGCCAGCGCTTTGGGTTACAGATGAAATTTGTCAATGGCCAGCTCACTACAAAGCGGATGAATTAGTGAAGGCCGTACGGAGCCAGGAGCAGCCTGGAGTCACATGGGATGCATTTCGTGTTCAAATTTTATATACAGCTGcaaactACAAACATGCTTGTCTAAAACTTCCTGAAGCTGAAGCCTACACTGATCTGCAAACAGCAGAGGAAGACAAGGATGACTATCCAAAGAAAAAACGAAAACGTCTGCCAAACATTCACTTTGAAAGTGATAGTGAGGAGGAAGTTCCTGTCAAACAAAAAATTACATTGCCTCCAGCCCCAAAAATAAAAACGCAGAACTTTGATAAACAGTCTGCAGTAAGGAGAAAAGTTCAACGGCCTGAaccacaaaaacaaaagacaagcCTAGATCTCAGACGGTCTCTTACAAGTCCTAAGCCTAGACAAAGTCCTGAGCCTTGGCAGTCTGTAAGAAGCCCTGAGCATAGACAATCAACAAGTCCGGAACCAAGATGCTCTGTGACTAGTCCTCAACCCCTTGAACTACATGAAAGCCAAAGACAATCAGGAACAACAATTTCAAATAGTCTGTCTTCTCTACTGCACAAACTTCTTACAAATCAAGAAATTATAATGGAACAACTTAAAATGATTCAGATGAACCTGCAAAATACAGGCCAACCTGTCCAGGGACAGGATTCCCTCAAGAGAGTAGTACTGCCACTCAAAGATGTGGCTGCCCTCCTTGCGTTAGAAAAACGCCTCAGAGAAGAGGAAGACCTCAAAAACAAAATGATCACTACCTTCAGTGTCATTGGAGGAGTTGACATTAAAGATAGTGTTTGGCGAATCATGAAGCACTGTTTTACCAACACCCTTGCCAAACAGCTCAACTGGCGTGGCATCAATGGCAAAACAGCTTTCCATGGACTGCATATGAAAGATGTAATTACTGGACTGTGAGAAACAACAGGCTCACAGCAGCAGCAACGGATCAAGAGGTAGAGTTTTACATTAAAAGATGGCTTCAACTTGCCAGTGACCGAGATGGAGGGAGAAGAGAAAGAGAGGAGCGAAGACGCAGTCTCCAGAAAAACTgTTTACAAGATGGCACTGATGGACCCAGTCAAGAagaacactaaataaaaaataaatgtctttACATAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133052

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00014109 lncRNA upstream 53667 8997541 ~ 9002404 (+) True XLOC_007133
TCONS_00014108 lncRNA upstream 92668 8947559 ~ 8963403 (+) False XLOC_007133
TCONS_00014100 lncRNA upstream 488564 8542170 ~ 8567507 (+) True XLOC_007128
TCONS_00016132 lncRNA upstream 1162069 7892123 ~ 7894002 (+) False XLOC_007120
TCONS_00015952 lncRNA upstream 1316013 7737429 ~ 7740058 (+) True XLOC_007119
TCONS_00014117 lncRNA downstream 355673 9422429 ~ 9427939 (+) True XLOC_007138
TCONS_00014123 lncRNA downstream 418311 9485067 ~ 9499220 (+) False XLOC_007141
TCONS_00016134 lncRNA downstream 504062 9570818 ~ 9578082 (+) True XLOC_007143
TCONS_00016135 lncRNA downstream 1424042 10490798 ~ 10492241 (+) True XLOC_007147
TCONS_00014140 lncRNA downstream 1661379 10728135 ~ 10731150 (+) True XLOC_007151
TCONS_00014110 mRNA upstream 27116 9009600 ~ 9028955 (+) True XLOC_007134
TCONS_00014107 mRNA upstream 53666 8947282 ~ 9002405 (+) False XLOC_007133
TCONS_00014106 mRNA upstream 84935 8940326 ~ 8971136 (+) False XLOC_007133
TCONS_00014103 mRNA upstream 300874 8710568 ~ 8755197 (+) False XLOC_007131
TCONS_00014104 mRNA upstream 308898 8715527 ~ 8747173 (+) True XLOC_007131
TCONS_00014113 mRNA downstream 179605 9246361 ~ 9294910 (+) True XLOC_007136
TCONS_00014114 mRNA downstream 220927 9287683 ~ 9336601 (+) False XLOC_007137
TCONS_00014116 mRNA downstream 354754 9421510 ~ 9428248 (+) False XLOC_007138
TCONS_00014118 mRNA downstream 365871 9432627 ~ 9447115 (+) True XLOC_007139
TCONS_00014119 mRNA downstream 389919 9456675 ~ 9469634 (+) False XLOC_007140
TCONS_00014092 other upstream 624796 8343494 ~ 8431275 (+) False XLOC_007124
TCONS_00014038 other upstream 2948916 6107039 ~ 6107155 (+) True XLOC_007093
TCONS_00014031 other upstream 3203406 5835158 ~ 5852665 (+) False XLOC_007088
TCONS_00014027 other upstream 3600248 5455707 ~ 5455823 (+) True XLOC_007085
TCONS_00014020 other upstream 4751901 4304052 ~ 4304170 (+) True XLOC_007078
TCONS_00014115 other downstream 233773 9300529 ~ 9314289 (+) True XLOC_007137
TCONS_00014141 other downstream 1749541 10816297 ~ 10816413 (+) True XLOC_007153
TCONS_00014154 other downstream 2390773 11457529 ~ 11459056 (+) False XLOC_007162
TCONS_00014158 other downstream 2861787 11928543 ~ 11929156 (+) False XLOC_007163
TCONS_00014169 other downstream 3123081 12189837 ~ 12203193 (+) True XLOC_007167

Expression Profile


//