RNA id: TCONS_00014281


Basic Information

Item Value
RNA id TCONS_00014281
length 12460
RNA type mRNA
GC content 0.39
exon number 21
gene id XLOC_007239
representative False

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 20342553 ~ 20737102 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCGGCGGTCTGTTCAGAATGAGTGACCGCCTCCAGCGAGCCCTGACTCCGCCTTCCGCAGGGCTGCGTGTCGCTGAGCGGAGAGAGGAGAGAGGCAGCGGCAGTGCGAGCTGCGCCGCGCTTCAGTGAGGGACACACTCAGTTCCTGCATATGCGGCCACCGGCACCTCACTGAAACACACCGACAATGGACCTATTCGAGTTTGACTTCTTCAGGGACTGGGAGCTGGAGCAACAGTGTCATTACGAGCAGGACCGCTCGGCGCTCAAGAAGAAGGAGTGGGAGCGAAGGACGCAGGAAGTGCAGCAGGATGAAGACTTGTTTTCTACCGGATTTAATCTGTTTGGTGAGCCATACAAGactaATAAAGGGGATGCCCTGGCTAATCGGGTACAAAACACACTTGGAAATTATGATGAAATGAAGGAGCTCCTGACCAGTCATTCTAACCAGAGTCACCTTGTGGGTATTCCTAAGAACTCTGTTCCCCAGACCCCAGTGGAGAAACCTGACCAGCCAGGCTTTTTCCCTGAGGCTCAGCGAAGCCGACCAGCTCTATCCCAACCTGGAAGCCACAGCACCTCTATGCCCCCACCCCCTGCTAACACCATACCAGGTTCAAGCGTCATGCATGGACATCAAGGCAAAAAGTCACGCTCTTCAGACTGGTCCCAAGGGGGTCACCGTTCAAGTGGTGTCCAGACCACGCAAGCGGCTAGTCGAGGGAAACACTCCAGTCATGAGCAGACCTCTAATAGACATGATCAGGACCAAGAGGACTCAAGTCCCAATCCTAATGGACCTACAACTTCGTCACACTCCAGCAGGAAGCAGGCACAAGCTGGCAAAGGTCCAGCTACAGCCGAGCTTGGCCTCGGAAAGTCTCCCGCTGAACAGGACTCATGTTCCCATGGCTCAAGCTCACCACTGGCCTCTACATCTCTGCTTCCCAGCGGCCTCTCGACGCCAACTTTTCCACAAGGCCTCCATTGCAAGCCCAGCAGCGCTGTGCAGCAGAAACCCACTGCCTATGTCAGGCCAATGGACGGCCAGGACCAGGTCCCCAATGATTCCCCAGAGCTTAAACCCCCTGTAGAGCTGGTGGAGGGGTACAATACTGTGCCATTTGGAGGTCTGTTGGATACCAAAAGCAGCACGACTGGGACCAAGGGCAAAATTCCTAAGCTGACACTGCCACAATCCGGGGAGGTCAGCCTGCCCAACGACTCCAACTGTGTGGAGGAAATTCTGCGGGAGATGACCCACTCCTGGCCTCCACCTCTCACTGCCATCCACACTCCAGGCAAAGCTGAACAGACCAAGTTTCCCATTCCATCAAAGgattCCCAGCATGTGACTTCAGGATATAATGCAAAACGCTGCAGTGTTCCTAGTAACAAGCCTGCGACCAAGTCAGTACCACAGAAGTCaatgcTTGAGGATGACCTGAAAATCAGCAGTGATGAAGAGGACAATGATCAGGCCGCTGAGAAGCCCAAGCCCAGGAGCACTGCACTCAATCTTCCTGGAAGCACAGCAGTACGGAGCAGCGAAGCGGCCGGCCACTCCAGCGGAGCGTCTGGAAGCTCCAGTGAATCTGAGAGCAGTTCTGAGTCTGATTCAGACAGCGAGAGCAGCTCTAGTGACAGTGAGTGCAACAGAGCGTCTCGCGCCGCCACACCAGAGcctgaaccaagCAAGTGGCAACTAgataagtggattaaaaaagtgAATCCTCACAATAAAGCACTAATTAACACCCAGGCAGATAGTCATGGGCTTAACAGTTCTCAACCTGATGAAAGCCAAACCTCTGAGAACCAGAGCTACAGCAAGAGCAAGCCCAGCACAGCCCTGGCACCAGCAGACCCCAAGGAGAGAACGTTGCTAAGTCCCATCCGAGAGAAAGCCAAACCCAAGGCTGGTCAGAAGGCTCCAGACAGCAAAAGCACCAAGGTGAAATCACCAGCCTCAGTGGAGCTCGCACCTCCCAGGAGAAGCACTGGAAAGAAGCAGCCCAAAAAGGTGGAGAGATCTTCCAGCAGTGAGGAGCACAACTGGCCAAGACCAGGAAACTCAAGTTCTACCCCAAAAGAGAAAGAGCCGCCGCCTTTAGAACCACCAAAACCTAGAGGCAAGGGCCCTGTGGTCAAGACTGCTCCAAGAAAGGAACCTCGGACCACCACAACAAGCACTGCACCAACTAACATCGCACCAGTTCCAGATAAAAAGAAGCACCGTGGACCCAATAAGATAATTCCCAAGTCTAAGGAATTCATAGAGACTGAGTCTTCTTCATCAGAGTGTCATTCGGACCCCGAGGAGCTCACTAAGGTTCAGCTTCCCTGTCCGGGTCCCAACACCCTAAGCCTGAAATCCAAGGATTGCAACAGCAATATCCTGAGTGTTAGTAGCCTTACCAGCACAAGCAGTACCTCCATTCCTGACCCAGGTGCCTCAGATCTCCTGGAAGAACACCTTTTTTCTCCTATCCCCATTGTACAAAATGAACTTTTGTCACCGCTGAGAGATTTTGAGGACATCAAGTCCCTTTGGGTTAAGATTGAACTCAGCTTCCTGTCGCGGATCCCAGGGCAAGACCCCCCAGAGCCTCCCCCAACCAAGGCTGAGTGCCGGGAGGTCAGCGTCAAGCACAGAAGGCAACAGTCGCCTGCCTCTATCCCTGCAGAAAAGAACCCAAGCAAATcgaagaggaaacacaagTCTGAGCACTGTGACGTGATGAGTGGTGGCAAGAAGCTTCGGTTGGACAAAGACACACTGCTGCTTCCTCCTTGTATCTCGCCAATACACAACCACAAGGTCTCCAGCACAAAAGATTCTTTAAAGAAGCAACCTCGCAAGAAGGATGATAAGTTGTTACCACCTCTACTATCCCCGTTGTCTGTTGAGCCAGTGGGACGTCCTCGGAGGAGCAGTGAATGCAGCTCCCTCAGTCAGGAAGGAAGCACATCCACCATCCCAAACAACCTCCCCTCCAGTCGTACAATACCTGCCTCCAGCTCCTCCTCGTCATCATCCTCATCACACAAACACCGCAAAGGAGAAAACAAAGCCTTCTCCCATTCCAAGACCAGCACTGAGGAAGACAGTCACAGCAAGCCATCGGGTGGTTTTCACGGCAATGGTCAGTCAGAAGCAGACCTCTGGTCAAACCCTTCAGCTCTGACAATGGAGCACATGGAGCCCCGGAGACCTAAACTCACATTTAATAGCACTGTTCACAGTGCAGATTACTACATGCAAGAAGCCAAGAAGTTGAAGCACAAGGCTGATGCTTTGATGGACAAATTCGGCAAAGCTGTGAATTATGCCGATGGGGCGCTTTCCTTCATCGAGTGTGGCAATGCCATGGAACGAGACCCGTTAGAGGCTAAGTCACCGTACACTATGTACTCTGAAACCGTAGAGCTCATCAGGTATGCAATGAGATTAAAGAACTTCACCAGTCATTCCGCAACAATAGCTGAGAAGAAGCTTGCTGTATTGTGcaaTCGTTGTTTGTCACTTTTGTACTTGCGAATGTTCAAGCTGAAGAAAGATCATGCGATGAAGTATTCCCGCTCACTAATGGAGTATTTCAAGAACTCTGCAAAGAGCTCGCAAGCACCTTCACCGTGGGGAGCCAATGGAAAGAGCACAGGTACCCCGTCCCCCATGTCCCTAAGCCCGTCTCCTGTCAGCTCGGTCAGCAGCAGCGCAGGAGCCATGGGTTCTTCCTCGGCCTCTGGAAGTGTGGCCATTCCCCAACGCATACACCACATGGCAGCCAGTCATGTCAACATCACCAACAACATCCTGCGCAGCTATGAACACTGGGAAACCGCTGACAAGCTGGCCCAGGAAAGTCAAGAGTTCTTTGTGGAGCTGGACTCAGTAATGGAACCATTGACGCAGCACAGCAGCATGACAGAACTGGTGCGCTACATACGCCAAGGACTGCACTGGCTTCGGCTGGAGGCCCATTTGTTATAGTGCTGGCGCTTCCACTGtgctcttcctctctctctgtctgtctttctctcacTCTCTTCCCCACCGTTCATCACTACCTCCACCATCTTTGCCATCCAGAACCTTGAGGGAAGTCGGCAGTTTACCACTAGCGAGCCTCAGAACTGTGAGTTTTTCCCTGGAGGGCTCCGTATCCTCGATCCTGCTTGATTCCTGTAAGCGTGTCAGGAAAATCTTGGGATTTCGAGGAAGGATGGCGCACTTCTGGGTCCTATCAGCACAACGGGTGGCCAAATTTATGCATCTGGTACAAGAACGGTAGCAGTGGGCAACTTGATAATGCTGTCGAACAAAATTCAACTAGTGACCTCTGTGTGCAAATCTCATTTGCTCTGCAAGGCAGGTTAGGCCAGAAATATACTTCACGCAAGTATAAAATGCCGGATATGAATGCTTGATTAGCATAGCTCAGTGCACAACAATGCTGAATATTCTAGATGTACAATATTAAACCTCAGCGATCGAGGGGTAAGAGCGATACCTTTGAAGTTTAGGGTCAGTacgataaatgttttaaaataagattatcctactcaccaagactgcatttatttcatcaaatacAGAAcaatttgtaaaatgttattgctcTATTCCTTATtccacatttgtacttaaaggtcaatattaattcctcaagggtacatattagtacctaaaagtacaaaagtgttcctcttaaatgtttaaggtactaatatatacttttaaggtaccaatttACCCAAGGTACCCTTTACATACAaacatgtaccttttgaaaaggtaccacccctgtGACTGCTCAtgaacctttatttttgagagtgatccttcagaaattactctattattattattattattattattattattattattattattattattatcatcatcattaatggtaatagtaataaaagcaagtataaatggagtaataatttcatttaaaactactaacaataattaatacataaatatttaataaataaatatttaacaagttaactttttttacatttaataaataccgccttgatgaacaaatcatttaaaaaaaaaagaaagaaaaaaattgacaCCAAACTGTTAAACGGTAGTTATATATCTGTGTCAATgacattacatataaaatatatacgcatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttattattaggttTACATAATTTGAAAGATTATTTATGACTTTGATTCAATTTCAAATTTTCTACAATAATTTAGAATTTTCAATGTTATGTCCTGATTTAAAAGAAAAGTTTAGACAAAGACAAAAGTtacgtcatcatttactcattctccacttgttccaaatgtGTTtgagttgaacacaaaggaagatatactgaagaacgTTGGGgaaacttgtaattttttttctactatggatgccaATGGTTGTTTTTTCCTCTAACATTGTTCAGAATATCATGCTTTGCGTTCAACTgaggaaagaaattcataaaagtttagaaccactggAGTGTAAGTAAACATtgagaaaattttcatttttttgatgaactatcactttcaaattgaattaaataattaggtcacactttattttgatggtccattcgttgaacttaagttacattgcatcaaaatgccaactaattcttataacattataagtagactgttaggttggggttagggttagtgtaaattgacatgtacttgcaaaatatcttatagtctgttaaatgtctgtttagcagcagtaataaaatattaagcagacattctactaataatcaaatggattatcaaaataaagtgtttttgatTCTaaactttcatatatatatacacattcacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatacatatatacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattaggacaTATTAAGTTGATTAGCTGTACAAAAATTTATgatgttccaaaatatttttgtgGCAGAGCATTTATCATGCTTATAATGGcactaataataatttcaaacatATGCTTTTTTAGCTTTATAATCTAGCAAATGATTTCCACAAAAATGTTACTAgttttagaatgatttctgagggATCACCTGACAAAAACAAATCAACTTAGTCAAGATAGaatgaaatgacattttaaataaagcaaaacaaaaaactattttaaattgttacaatATTTCCacaatacttctttttttttttggtgaaccaaagagacttttaaaaaaaaataaaattcaacctTTTTATATCGATAGCGCATACAaatatcatgaaaaaaaaaaacgtattgcAGCATGTAAGGAAATGGGAATTGATATCGTACAGACATTTCTATACTTGCGCCGAGTATATTTCAGGCCTCAGCACTGCGAGATTGAGTTACACAGGAATTAGGGTACAGATAAATGAGCTGTTAACACCGCATTCATCTCAAACACAGAAATTCACCCCATCTGGAGATTCACACATATCCATTTGAAATGGCTCTGATCTGTCAGGGCTTTTGTAAGGACGGCTGCGGCAGTCATCTATTCTCTCAAACGTCACCGTCTTTCTCTTTTACCGTGGCACTATGACAGCTGGCATCGGTGTGAAAAGAACCAAAGCTGCGTTCTCCGAGACACTTGGCGTCTTGCGTTTGCAGCAGCGGAGGCTGATGGGAGATTTTTCCCTGTGCAATTAActtatacatatgcacatatgaCAGATTGATATCTCTGAGAGGGCGGGTtatcagagattttttttttccccaatatgtACCATAATGACTGTGTTGTATATGACAGCTACTTTAACTGTTTGGTGTTTGTTCAATCTTGCATGTTAATGCAGAGAGGTAGAGGTAGAACCGAGGGGCATCAGCGTATTTCATGAGCACTATGAAAATTACATGCATTTtgtccagtttttttttcttaacgaATTTATGGCTGGCCTGATAATGTTTAACGTTAAGTTCTGATCTACAGAgagtttattaatgcatttttctAACAGACACTTCCAAAAACAAGCTTGGTCAGGATTTTATGACCAAAATGATTGCATCGTGATCAAatcacaaaactttttttaaacaattgttcATTCACCATGCGTAAACTCTTTACGGATGAGTTTAATGTTAAATATGAGGCAAAAATGTTGATCAGTGAGACACAAACTGTTTGTTCTTGCTGGTGTGTTCATTAATGTAGGTatttgagaatgtgtgtgtgtgtgcagattttCATTGGCAGGGTGTGTTCATTGTATTGTAAAGCTTCATATATCTGTCATGTGAATgtcagagcgtgtgtgtgtgtgtgtgtatgtgtgtgtttgtttgggtgAAATAGACATTTCACGAAGATTATTCTAAGTGCCTGCGTATCCAATGGAAATTTATTAGAGTCTATATTTAAGGATGACAATGGATCTGAATGATTTTCCATACCATATTGGTATAtccaatttttttctgttttcataacatgactatttatttattttctttgtaaaatgGCTGTTGTGGTACCTGTTTTTCGCTTTAAGTGCATTTCAGTTTTTTGGTTTTCTGCTCTGATGATGATAGAAAGTGACTGACGTCTAAGTGCATTTGAATTCTTTACATATTGTACAGCTTAATGTATACATCATTCCTCATTACCTCCTTTTACGGATGATTCCGGTTCACGCAACGTAGCGAGAAACGCTTACTGTCTATTATAGTGCAATACTCACTGTAGCACATCAAAAGCAATATGtcgatatttaaaaaaacaactatcAGAAAGTATTGTTTTCTAAATTAATTACAGCGCAAAAGTAAGTTTTATTCACTTCATGGACTTCGTCTGATGCatggctaaaaaaataaataaataaataaaataaaaagagtcaTTATGCAAATAGTGAAATTCTGCTGCCTGTGAACAATATTACCAGCTGTTTTTACTCATATGTGGCTGCTTTCTAAAATGTGTGTGGTTTTCTCCGGCATCTGTTGCTGTGCTTGTTTGAGTTATGCCAGTCTGCCAGAGAAATCTGTGGGCTTCTGGCAGTTCATCAGAAAGCGGCAGCACTGAAGTAAACAACCTGCTCTGCCTATTAGATGCACCTCTAATGCCCCAGTTTGTCTTGCAATAAAAAAGCCAAGTTTAGTTCTTTTAttctttagtttcttttttatatGTTGTTCCTGAATTGGAATTCAAGCAAGCAGGGGAAAAAAACTATTTGGTTTAATTTAGTTGCACACATTTGTTTCATAAAGCTAATTGTAAGAAGCTTTTTAATTCATTACATGATTGCAGTTTgattattacattataataaagaaaagtcACCTAATTGTTATCAATTTGGTTAACTGTAAGTATTGTTATTACTTTAGACTAAAATAAATGGGCACCCACCACTAAAAATGAGCTTTAAGAAACAAATGTGTAGTACAAGAAACCAAACTGGGTTTTTTCAACTTGCTTGAATCCCAATTCACGGACAACATATatcttttttataaattgttcctTAATAGGAATTCAAGCAAGGAGGAAAACCCCAATTTGTTTTAATGTAGTACACATTTGTTTCATAAAgctaataagcagtttttaacttaTTACATTGTTACAAATTGGTTATTACATTGTAATATAGAGAAGTCACCATAAATTTGATTTCAATGTTGTTAACCATAAGTATAAATATTACTCTGGACTAAAATCAAGGCAAAAAATCGGACACCCACCACTAAAAATTAGCTTTATGAAACAAATTGTCACCTTGCAATTATAAgtttctatctgcgttctgaatgatttggGGATAATGAGCTTTAAAGCTTTCGCATTCCAtagcatacagtatgtgtgtaatatttgtttttaaataaaattcttaaatgttaacaacttaaaaaaaaaaaaacatcccataatgtaaataagttgtcatttaataaaaatatgtcaataactcaattttgacaaaatgtgAGATTGAACTTTATAtatctaaggtgacgaaatgtgtGCCACTACATTAAACCAAATTGGGTTTTTTCTACTTGCTTGAATCCCAATTCAGAAACAACATATATCTTTTAATGTAATGTAGTAGCACACGTTTGTTTCATAAAGCTAATTTTaagaagttttttattttattacaatgttACAAATTGGCTATTACGttgtaataaagaaaatccaGCACACACGTCATTTTAATTTGGTTAACCATAAGTATGAATATTACTCTGAAATTAAAAAAGGCCACTCACCACTAAAATGAAACAGCCACTCAACAGTGATTATTTAAAACAGCCTTACTTGCCGAGATAAGTTCTAAGAACACCTGAGAGTGCAATATGGTTTGGCAcgataatcaaataaaaaagacaGCATTATAATTATATCAATTTGTAATCTGATGCACTGAACTAagatttttttgtgcattttgtaaaaaaaaaaaaaaaaaaacaatcacttaTTTGAAAATGCATCCTGCACAAAAACAAATCTGCCAAAATTTGTATTAAGAAAAGGATAAAATCCAAagagaaaatgattttttttttatttttttttcattaaatcaaAATGAGTAGTAGTTTTCTAAAAGATATTTGTTCCCCATGATCAATGGCCCACTCAGATTCAAGTAATGTGTAATTTTGACCAATTTGGCAATTAGATTCTTATGGTTTTAATCAGATTTGATTTAAATCTggaattgaaatattaaaaatcataaccaACATAAGTTATACATGAAATACTGTGATGCAGTTTCCCAGCACTGGCTTTAATTAGATCTTTATCTGTAAGTCTCTATaagaatgatttataaatatatttgagaaaaaaagatgTCATTTTCTGCCACAATAAAACCTCTACAGTTTAACTCCTTAACTGTCGCACCATTTTTGAGTTCACACTTGGAAATGATATATGCATGCATATTAAATCTAGTTTGTTAAGATAAGTTCTGGATTAGACAAATGTAATACATATGTACAGAAAAGTAACAGTTCAGGgcttaatatttgaaataaaaaattaatattattattaactgaaAATAATTTCAAATTTGCATACAATTTCAAAAACATTAATGACCGGCAAATTTCATGTTTATTTGCTGTATTTGATTAATACAATGATAAAAAGGTTGTTCTTTGCATAAATAAGAGAAAAACTAGAATCAGTGTTAAAGTTTCATCATTAAAAGAGGCATTTTCAAATACTGACCAAACCAAgacaaaataaagatttatagTAATTCTATATTTTAAGCAATGAATATATCATCAATATTTACAGTTTGCGAAAATCACACCCATTCGTCAAATGAAGCCTAAATCATCAATGTTGTCCATAAAAGTGccactaaaaattaaaaaaataataataatatttgtttttgcaaatgaacTTTACATTGGATCGGTCTTGTTTTGcattttatcatatttattttaaaaccaacATTTGAAGCAGTCTGGAAAGCATGTTGCTTACTGTCcatcaataaaaaacaaaactgcacaaTGCTTTAACATTTACTTTGATGGTGTAGTATTTACATCACCTTTGCTTTTAACAaagtttaaatgctttaaattatACCAGTGCATTAGCAATTACACCACATCCCGTTTTGACTCCCTGTGCTTCTCAATGAGTTCTATACAACGATGAAGACAAAAGCCCATCAGGAAGAACAATCTCCAATTAAAGCAGCCTCAGCTTGAGGCTTTCTATTTGCTCTGCAGATTAAACATGTAAATAGCGCTTCGTTACCGTAAAACACCACATCATGTTATCAATTAAAGATCTTCCAATTCTGTCACTGATTAACAGGTGGCTTGTTCTACGgtacagttattaaaaaaaaaacagacatcatCAAAAAACCCTCATTTTTATTAAACTCGAGCACTTCTCAGTTTATCAAGCGTACGAATATCATATCAATTTCATTTATTTGCTGAATGAATCGTATTTAAAAAAGTCAGTTTCTAACTTCATCAGAGATTTCTTCTATGGAAAAAAGTACCTtgttgcaaatgccttgttacCAATGTAAACTGTAGAGAACAGTTATTTGCAGTCTTGTTCTGTCCGTTTGTCTTTCTCTGTACAGTATAAGGTTGTGCGCCATAATTTGTCTTCTTGAGATTGTAATCGCATTAAGGCATTGCATTCGACCCTATCCTAAGCCCATCCACAGCTTTGAATCTGTGAAGATATGCAACATCTCTCATTGCTTCCATGTCATACAAGTCAGCCTTTCTGCTACGTTCAACATTTTCAGTTCAACTTCACCGACTGGGAGAATAGAACTGTTGAATCAGAGTGTACAAATGGGTAACACGACAATGAATTCCTTACAGGAGAAAAGGTATTTACTGTACACAACAAGGCAATACTTACTTAAGGTGGAAAGCCATTGAAGTAACCAAATGAAAGTGCGTCGGTGGCATAATGCGTTCAAAACGATGTAAATGCCAGAGCAAAATCTAAAATTGAAATTGGAGCAACGTCCCAAAGAGCAGTTGATCTTGATGGAGCCTTATGGGAAATCATAGCGTTTCCTTTCCTTGTGGTTTCAAAAATGCAGCCATCATACTGTTAAAGAAAGTTTCATTTTGATAAAATATGCAAACAgatatggagaaaaaaataaactattacttAATGGCAAAGAAAAACAAGTTTCTTACGAGTTTTAATGCAGCATGACTCTTTCTACCGAGTAACTGTCATAATGGAAGTTGCGTTTAATTACTACTCGATTTCAAAGACGTCAGTATTGTTATATGTTGTAGACATATTTAAAGCTATCAGAAAGCAGTTCTGTGAAACTTGCGCTTTATAGAAATGCCTCAATGCTACCTATTGCCTAAAAAGATGTCGGTTTAAGGATTTCTACTTGGAGGGAAAAGGCCATTATCTGATTGTTGGTAAAGTTGTACACATTACTTGCAAGGACAGAAGATTTCAATGTTCTGGCATGCTGTAGaatttaggtttttgttttgtttctttttttgtacaGAGCAGGTGACCTGCAATGCTTTGAATTTATACATTGTATAGTTGTACCgattcattttaaaatgcgtTATGTATCGAAAAACCTTCCTGCCTGGTTAGCTTTGTATTTCCAATGTGTTGCACAAGTCCagcaattttgtttttttattattattgttctttttgttcttcttttttggctattgtatgtttattttataataaaactgtaaaacGTAATGAACAAAAC

Function

GO:

id name namespace
GO:0010468 regulation of gene expression biological_process
GO:0043484 regulation of RNA splicing biological_process
GO:0005634 nucleus cellular_component
GO:0016607 nuclear speck cellular_component
GO:0002151 G-quadruplex RNA binding molecular_function

KEGG:

id description
ko03021 Transcription machinery

ZFIN:

id description
ZDB-GENE-110411-190 Predicted to enable G-quadruplex RNA binding activity. Predicted to be involved in regulation of RNA splicing. Predicted to be located in nucleus. Predicted to be active in nuclear speck. Is expressed in intermediate cell mass of mesoderm. Human ortholog(s) of this gene implicated in X-linked intellectual developmental disorder 109. Orthologous to human AFF2 (AF4/FMR2 family member 2).

Ensembl:

ensembl_id ENSDART00000074070

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00016194 lncRNA upstream 73159 20268011 ~ 20269394 (+) False XLOC_007238
TCONS_00016195 lncRNA upstream 73159 20268793 ~ 20269394 (+) True XLOC_007238
TCONS_00014279 lncRNA upstream 531068 19806641 ~ 19811485 (+) True XLOC_007236
TCONS_00014278 lncRNA upstream 533429 19806641 ~ 19809124 (+) False XLOC_007236
TCONS_00015968 lncRNA upstream 626215 19712262 ~ 19716338 (+) True XLOC_007235
TCONS_00015969 lncRNA downstream 22704 20759629 ~ 20761559 (+) True XLOC_007240
TCONS_00016197 lncRNA downstream 104619 20841544 ~ 20845040 (+) False XLOC_007241
TCONS_00016198 lncRNA downstream 104623 20841548 ~ 20845040 (+) True XLOC_007241
TCONS_00014294 lncRNA downstream 260804 20997729 ~ 20999989 (+) True XLOC_007245
TCONS_00014300 lncRNA downstream 369640 21106565 ~ 21111641 (+) False XLOC_007250
TCONS_00014280 mRNA upstream 151272 20156477 ~ 20191281 (+) True XLOC_007237
TCONS_00014277 mRNA upstream 1080820 19258702 ~ 19261733 (+) True XLOC_007234
TCONS_00014276 mRNA upstream 1081287 19258702 ~ 19261266 (+) False XLOC_007234
TCONS_00014272 mRNA upstream 1552772 18781082 ~ 18789781 (+) False XLOC_007231
TCONS_00014283 mRNA downstream 156140 20893065 ~ 20898499 (+) True XLOC_007242
TCONS_00014284 mRNA downstream 164064 20900989 ~ 20908036 (+) True XLOC_007243
TCONS_00014285 mRNA downstream 174385 20911310 ~ 20917866 (+) True XLOC_007244
TCONS_00014286 mRNA downstream 181776 20918701 ~ 20973438 (+) False XLOC_007245
TCONS_00014287 mRNA downstream 181784 20918709 ~ 20966417 (+) False XLOC_007245
TCONS_00014275 other upstream 1542995 18799434 ~ 18799558 (+) True XLOC_007232
TCONS_00014213 other upstream 5432883 14909553 ~ 14909670 (+) True XLOC_007192
TCONS_00014209 other upstream 5496394 14844916 ~ 14846159 (+) True XLOC_007189
TCONS_00014206 other upstream 5505283 14837073 ~ 14837270 (+) True XLOC_007188
TCONS_00014169 other upstream 8139360 12189837 ~ 12203193 (+) True XLOC_007167
TCONS_00014313 other downstream 501757 21238682 ~ 21245773 (+) False XLOC_007253
TCONS_00014315 other downstream 934182 21671107 ~ 21678917 (+) False XLOC_007255
TCONS_00014324 other downstream 1002691 21739616 ~ 21745484 (+) True XLOC_007257
TCONS_00014351 other downstream 1579309 22316234 ~ 22319001 (+) False XLOC_007271
TCONS_00014367 other downstream 2339202 23076127 ~ 23155656 (+) False XLOC_007280

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000110_02930636_02953666.mRNA True 2769 mRNA 0.50 13 CI01000110 2930636 ~ 2953965 (+)
bowfin (Amia calva) AMCG00021236 True 3379 mRNA 0.49 14 CM030130.1 10527150 ~ 10551602 (-)