RNA id: TU95705


Basic Information

Item Value
RNA id TU95705
length 200
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G84134
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9805786 ~ 9805985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTAAAACCGCCTCAAATTCAAATCAACTAATCATTTCTTCTCTTGAATACCTAGAATCAGTGCCATATTTACATGTGTGATGTATTGTTGTGCCCTGGAATTACTTGCTATTACATAATGCAACAACTGCTGCTTTAAACTGTATTTCATCTCACAAAAAGCATCTGCATGCACACAATTTCAGCTTAGACATGTGATTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95616 lncRNA upstream 53828 9751611 ~ 9751958 (+) True G84046
TU95593 lncRNA upstream 146049 9659307 ~ 9659737 (+) True G84023
TU95557 lncRNA upstream 203602 9601776 ~ 9602184 (+) True G84005
TU95506 lncRNA upstream 242433 9563054 ~ 9563353 (+) True G83958
TU94080 lncRNA upstream 326792 9438212 ~ 9478994 (+) True G82694
TU95712 lncRNA downstream 7143 9813128 ~ 9813566 (+) True G84141
TU95691 lncRNA downstream 15795 9821780 ~ 9822014 (+) True G84120
TU95689 lncRNA downstream 18866 9824851 ~ 9828803 (+) True G84118
TU95733 lncRNA downstream 57860 9863845 ~ 9864164 (+) True G84162
TU95734 lncRNA downstream 58403 9864388 ~ 9864588 (+) True G84163
CI01000013_09681047_09683275.mRNA mRNA upstream 122353 9681047 ~ 9683433 (+) True CI01000013_09681047_09683275
CI01000013_09430170_09443518.mRNA mRNA upstream 361763 9430170 ~ 9444023 (+) True CI01000013_09430170_09443518
CI01000013_09279917_09290301.mRNA mRNA upstream 515026 9279917 ~ 9290760 (+) True CI01000013_09279917_09290301
CI01000013_09243644_09260619.mRNA mRNA upstream 545167 9243644 ~ 9260619 (+) True CI01000013_09243644_09260619
CI01000013_09178561_09180465.mRNA mRNA upstream 624629 9177107 ~ 9181157 (+) False CI01000013_09178561_09180465
CI01000013_10261599_10283287.mRNA mRNA downstream 454286 10260271 ~ 10283967 (+) True CI01000013_10261599_10283287
CI01000013_10335904_10336688.mRNA mRNA downstream 529919 10335904 ~ 10336896 (+) True CI01000013_10335904_10336688
CI01000013_10502138_10525511.mRNA mRNA downstream 694705 10500690 ~ 10525674 (+) True CI01000013_10502138_10525511
CI01000013_10586449_10594082.mRNA mRNA downstream 779833 10585818 ~ 10594442 (+) True CI01000013_10586449_10594082
CI01000013_10756927_10790192.mRNA mRNA downstream 950942 10756927 ~ 10790489 (+) False CI01000013_10756927_10790192
TU95556 other upstream 203551 9601611 ~ 9602235 (+) False G84005
TU95558 other upstream 203602 9601611 ~ 9602184 (+) False G84005
TU93966 other upstream 470838 9329329 ~ 9334948 (+) True G82581
TU93521 other upstream 1764443 8028338 ~ 8041343 (+) True G82168
TU93312 other upstream 2467547 7335945 ~ 7338239 (+) True G81994
TU95773 other downstream 224623 10030608 ~ 10036793 (+) False G84194
TU95794 other downstream 270469 10076454 ~ 10079336 (+) True G84215
TU95833 other downstream 409142 10215127 ~ 10215962 (+) True G84250
TU96004 other downstream 966301 10772286 ~ 10784757 (+) False CI01000013_10756927_10790192
TU96453 other downstream 2364004 12169989 ~ 12170818 (+) True G84768

Expression Profile