Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00014316 |
| length | 643 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | XLOC_007255 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007125.7 |
| NCBI id | CM002898.2 |
| chromosome length | 52660232 |
| location | 21671107 ~ 21678917 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009060 | aerobic respiration | biological_process |
| GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | biological_process |
| GO:0032981 | mitochondrial respiratory chain complex I assembly | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005747 | mitochondrial respiratory chain complex I | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0051539 | 4 iron, 4 sulfur cluster binding | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050522-131 | Predicted to enable 4 iron, 4 sulfur cluster binding activity; metal ion binding activity; and oxidoreductase activity, acting on NAD(P)H. Predicted to contribute to NADH dehydrogenase activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone and mitochondrial respiratory chain complex I assembly. Predicted to be located in membrane. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 2. Orthologous to human NDUFS8 (NADH:ubiquinone oxidoreductase core subunit S8). |
| ensembl_id | ENSDART00000079649 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00015970 | lncRNA | upstream | 378188 | 21293114 ~ 21293498 (+) | True | XLOC_007254 |
| TCONS_00014311 | lncRNA | upstream | 441535 | 21225415 ~ 21230151 (+) | True | XLOC_007252 |
| TCONS_00014310 | lncRNA | upstream | 443546 | 21224720 ~ 21228140 (+) | False | XLOC_007252 |
| TCONS_00014300 | lncRNA | upstream | 560045 | 21106565 ~ 21111641 (+) | False | XLOC_007250 |
| TCONS_00014294 | lncRNA | upstream | 671697 | 20997729 ~ 20999989 (+) | True | XLOC_007245 |
| TCONS_00014320 | lncRNA | downstream | 7624 | 21686224 ~ 21693391 (+) | True | XLOC_007256 |
| TCONS_00015971 | lncRNA | downstream | 98957 | 21777557 ~ 21777836 (+) | True | XLOC_007259 |
| TCONS_00014340 | lncRNA | downstream | 450496 | 22129096 ~ 22134637 (+) | False | XLOC_007268 |
| TCONS_00014343 | lncRNA | downstream | 455237 | 22133837 ~ 22134637 (+) | True | XLOC_007268 |
| TCONS_00016199 | lncRNA | downstream | 478067 | 22156667 ~ 22164645 (+) | True | XLOC_007269 |
| TCONS_00014312 | mRNA | upstream | 429451 | 21238682 ~ 21242235 (+) | False | XLOC_007253 |
| TCONS_00014314 | mRNA | upstream | 430822 | 21238778 ~ 21240864 (+) | True | XLOC_007253 |
| TCONS_00014309 | mRNA | upstream | 441518 | 21222287 ~ 21230168 (+) | False | XLOC_007252 |
| TCONS_00014305 | mRNA | upstream | 472184 | 21140612 ~ 21199502 (+) | False | XLOC_007251 |
| TCONS_00014317 | mRNA | downstream | 6937 | 21685537 ~ 21693914 (+) | False | XLOC_007256 |
| TCONS_00014318 | mRNA | downstream | 7032 | 21685632 ~ 21693507 (+) | False | XLOC_007256 |
| TCONS_00014319 | mRNA | downstream | 7607 | 21686207 ~ 21693914 (+) | False | XLOC_007256 |
| TCONS_00014321 | mRNA | downstream | 20529 | 21699129 ~ 21746346 (+) | False | XLOC_007257 |
| TCONS_00014322 | mRNA | downstream | 20814 | 21699414 ~ 21751346 (+) | False | XLOC_007257 |
| TCONS_00014313 | other | upstream | 425913 | 21238682 ~ 21245773 (+) | False | XLOC_007253 |
| TCONS_00014275 | other | upstream | 2872128 | 18799434 ~ 18799558 (+) | True | XLOC_007232 |
| TCONS_00014213 | other | upstream | 6762016 | 14909553 ~ 14909670 (+) | True | XLOC_007192 |
| TCONS_00014209 | other | upstream | 6825527 | 14844916 ~ 14846159 (+) | True | XLOC_007189 |
| TCONS_00014206 | other | upstream | 6834416 | 14837073 ~ 14837270 (+) | True | XLOC_007188 |
| TCONS_00014324 | other | downstream | 61016 | 21739616 ~ 21745484 (+) | True | XLOC_007257 |
| TCONS_00014351 | other | downstream | 637634 | 22316234 ~ 22319001 (+) | False | XLOC_007271 |
| TCONS_00014367 | other | downstream | 1397527 | 23076127 ~ 23155656 (+) | False | XLOC_007280 |
| TCONS_00014372 | other | downstream | 1508512 | 23187112 ~ 23372472 (+) | True | XLOC_007280 |
| TCONS_00014405 | other | downstream | 2678800 | 24357400 ~ 24357517 (+) | True | XLOC_007298 |
