RNA id: TCONS_00014370


Basic Information

Item Value
RNA id TCONS_00014370
length 2809
RNA type mRNA
GC content 0.49
exon number 16
gene id XLOC_007280
representative False

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 23076127 ~ 23479577 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTCAACCTTAGACTGAACTACATCCACTTGTTTTGGACACTTGACTACAcatttaaagggcatctatgGGAGCTGTCAGCGGGAGATTGAGTGTCTGGTTAGCACATGATGTTCAAGGACTACAGATCTGGCCGAGCTGTAGGTCTAAATCCGCTGCCTTTTGATCCTGCCACAAACAACGAACCGCTACAATTCAACAGCTCCAATGGTCCTCTGGTCTCTGAGTGTCCACTGGAAAACGGAACAGAAAACAGCAAAAAGAGAAAGAGACCCAACCTTCCTCCAGagGGACTTCGGAATATTGGGATGGACTCCAACTCTTTAGCGATGCCCATTTCAGATCCTAATGCTTGGGCTACTGCCATGAATAACCTCGGAATGGCCCCCATGAGCATGACTGGCCAACCTATCATGTCAGATTTTGACCCCAGCCTTGGTATGATGACTGGCATTGCTCCAATGAACCCCATGATGCCCGGCCTTGGGATTGTGCCCCCGCCAGTTTCGCAAGACATGCCTATAGTGAAGGAAATCATCCACTGCAAGAGCTGCACACTCTTTCCACCAAACCCCAACCTGCCTCCTCCTGCCACCAGAGAGAGACCGCCGGGCTGTAAGACGGTGTTTGTGGGAGGTTTGCCAGAGAACGCCACAGAGCAGCTCATCGTAGAAGTGTTTGAACAGTGCGGAGGTATCATCGCCATCCGGAAGAGCAAGAAGAACTTCTGTCACATCCGTTTTGCAGAGGAGCACACAGTTGATAAGGCCCTCTTCCTGTCAGGTTACAGGATCAGGCTGGGATCAAGTACAGATAAGAAGGACACAGGCCGGCTGCATGTAGATTTTGCTCAGGCTAGAGATGACCTGTACGAATGGGAATGCAGACAGCGCATGCTGGCCCGGGAAGAAAGGCACCGTCGCAGAATAGAAGAGGACCGTTTACGCCCCCCCTCACCACCCCCCATTGTCCATTACTCTGAGCATGAATGTAGCCAGTTAGGAGAAAAACTCAAAGACGACTCCAAATTTCCCGAGGCGGTGCGTGTCCTGCTGACCTGGGTGGAACGAGGGGAGGTAAACCGCAGGAACGCCAACAACTTCTATTCAATGATCCAGTCCTCCAACAGCCACATTCGCAGACTGATGAACGAAAAGGCCGCCCATGAGAAGGAGATGGAGGAAGCCAAGGACAAGTTCAAGAACGCCCTTTCGGGAATTTTAGTACAATTTGAGCAGATTGTGTCTGTATTCCACGCTTCTTCCAAACAAAAGGCATGGGACCATTTCTCCAAAGCCCAGCGCAAGAACCTGGACATGTGGCGAAAGCAAGCAGAGGAGATCAGAAACATCCACAACGAAGAGCTGATGGGAATTCGGAGGGAGGAGGAAATGGAGATGTCGGATGATGACATGGAGGATGTTCCAGAAAGCAAGGATTTGGATGACTCAGGGCCGCTGGCTCAGGTGGAGGCTCTGAAAGAGGAGAACGACAGTCTGCGGTGTCAGCTGGATGCCTACAGGAACGAGGTGGAGCTTTTGAAACAGGAGCAGGGTAAAGCGCAGCCCCAGCGCAGCGAGGAGGATGCCACCCGCCAGCAGCAGCTCAGCTTCCTGCAGCAGGCTCTGCAGGGCATGCAGAAGCAACTGCTCAAGCTTCGCGAGGATCTGAAACAGAGGGAAATGGAGCTGGAGAAGAACTCAGAGGAAAAACAACAGCTCGAAAGCCAGATCCAGACCCTGAAAGATCGGATTCAAGCTTTTCCCACATCACACGCGCTGCCCCTGGAGACGGCCGAGCGGGAGGACAGAGGCGGCGATGAAAGTGCAAATCACGCCAGCGAAGCTGCGACGACGGCGGTGGTGTCCTGCAGCCAGGAGAAGGAAAACCTGCCAGAAAAAGGTCCCCCCAGTCCGGTGAAGTCAGAAAGAGAGGCTCTGCTTGTCGGAATCATCTCAACGTTTCTTCATGTCCATCCGTTCGGAGCCAGCATTGAGTATATCTGTTCCTATTTACAACGGCTGGACACTAAGATCAGTACCACAGAAGTGGAGAGTCTTTTGGGTCGCCTGCCCTGCACGTTTAAACAGGAATTAACGGGCGTTGGGGCGAGTTTGGAGAAACGCTGGAAGTTCTGTGGGTTTGAAGGCATTAAGACAGCGTAGAGACACAGGTTGGGCTTTTCTCTAGAAACAAAGTGGCCGATAGACCAGAGGGGTTACAAACAATGATCTGCCAGCCCTCTGTGTCCATCCGCCTATGGGATTTCAAAATCTCAGAAAACCCGGAGAGCCTCAAgactttggtgtgtgtgtgtgtagtatgttTTAGTATGTGTACACACATgtcagagtgtgtgtatgtgcaccATGTGAACAGACTGTGCGCTTCTACCACACAACGTGAAAAACTCATCGGGTAAAAATCAGGGTCTGCTGAACCGAGGACTTGAACTGTCAACACACATTTTCTTTTTCTCGTTTCACctgtaatttgtaaaaaaacaaaacaaaaaaaaacaaataaagaacatGAATATATTTCTTTTCTCTTCTGTATAGGCTGCAGAACAGTTGCATAGAATCTTTTGTTCACATATCCTGTAAATGTTTGAATaacttgctatttttaaataaaaaagagatttttaaaaatcGACTAGTATTTGTTAATTAACAAGCAGTTTACTGTAGGCCAGTGCCTTTCAAAAGACCTTCAAAAGTTCACGTTTCAGCACCGCTGCTAATTAAAGGAGGAATTTGGGGATAAATATAGGCTATCCTCTAACTTCACCTGCATTTATGCCACAC

Function

GO:

id name namespace
GO:0007624 ultradian rhythm biological_process
GO:0009897 external side of plasma membrane cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-157 Predicted to enable protein-disulfide reductase activity. Predicted to act upstream of or within ultradian rhythm. Predicted to be located in external side of plasma membrane. Predicted to be active in plasma membrane. Orthologous to human ENOX2 (ecto-NOX disulfide-thiol exchanger 2).

Ensembl:

ensembl_id ENSDART00000084664

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00015972 lncRNA upstream 198801 22957867 ~ 22959220 (+) True XLOC_007279
TCONS_00016203 lncRNA upstream 198809 22841157 ~ 22959212 (+) False XLOC_007279
TCONS_00014383 lncRNA downstream 230065 23709642 ~ 23710588 (+) True XLOC_007284
TCONS_00014388 lncRNA downstream 481151 23960728 ~ 23964141 (+) True XLOC_007287
TCONS_00014394 lncRNA downstream 735469 24215046 ~ 24217788 (+) False XLOC_007292
TCONS_00016205 lncRNA downstream 751334 24230911 ~ 24234703 (+) True XLOC_007293
TCONS_00015973 lncRNA downstream 798019 24277596 ~ 24280411 (+) False XLOC_007296
TCONS_00014362 mRNA upstream 449244 22591624 ~ 22708777 (+) False XLOC_007277
TCONS_00014363 mRNA upstream 461193 22680485 ~ 22696828 (+) True XLOC_007277
TCONS_00014360 mRNA upstream 634222 22498757 ~ 22523799 (+) False XLOC_007276
TCONS_00014359 mRNA upstream 678541 22467698 ~ 22479480 (+) True XLOC_007275
TCONS_00014358 mRNA upstream 679308 22467672 ~ 22478713 (+) False XLOC_007275
TCONS_00014373 mRNA downstream 38533 23518110 ~ 23591678 (+) False XLOC_007281
TCONS_00014375 mRNA downstream 41409 23520986 ~ 23591678 (+) False XLOC_007281
TCONS_00014374 mRNA downstream 41409 23520986 ~ 23591678 (+) True XLOC_007281
TCONS_00014376 mRNA downstream 114412 23593989 ~ 23679139 (+) False XLOC_007282
TCONS_00014377 mRNA downstream 189153 23668730 ~ 23678837 (+) True XLOC_007282
TCONS_00014367 other upstream 2365 23076127 ~ 23155656 (+) False XLOC_007280
TCONS_00014351 other upstream 839020 22316234 ~ 22319001 (+) False XLOC_007271
TCONS_00014324 other upstream 1412537 21739616 ~ 21745484 (+) True XLOC_007257
TCONS_00014315 other upstream 1479104 21671107 ~ 21678917 (+) False XLOC_007255
TCONS_00014313 other upstream 1912248 21238682 ~ 21245773 (+) False XLOC_007253
TCONS_00014405 other downstream 877823 24357400 ~ 24357517 (+) True XLOC_007298
TCONS_00014442 other downstream 3317327 26796904 ~ 26830566 (+) False XLOC_007327
TCONS_00014490 other downstream 6934200 30413777 ~ 30424854 (+) False XLOC_007352
TCONS_00014495 other downstream 7108390 30587967 ~ 30620257 (+) False XLOC_007356
TCONS_00014499 other downstream 7261411 30740988 ~ 30741116 (+) True XLOC_007359

Expression Profile

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