RNA id: CI01000016_00042281_00046080.mRNA


Basic Information

Item Value
RNA id CI01000016_00042281_00046080.mRNA
length 829
RNA type mRNA
GC content 0.41
exon number 4
gene id CI01000016_00042281_00046080
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 42244 ~ 46182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTATATAAAAGCTTCTTTTAGATGAGAAACATCAGTCATGGACCACATCCTCCCTGTGATCAACAGTGCTCCAGATCTTTGGTCACCATCCATGACCATGAACTATGAAATCCCCAAACCATTTAACAGTAATGCTGAACTGGGGGCAACAGAAAGAGCAAGAGGGAAAAACTGCAATGATACAACAAGACGAAAGAGAACAAAAGAGATGAAGCAAGCAAAGAAAGAGGCACAAACAAAAATAGCTTTGTGCTACATTGTTTCGACATGTTACATAAAATTTGTACATCCAAGTTGGATAGATCACAAAAGAACTCTGACCTATTCATCTCACAACTCATCTGTTATCTTTGCAACCGTTCCAAGATCAGCCCCACATTACAGCACCTACACTGGGCGCATTTCCAAAGAGAGAGAACGAGAGAACAGAGAGAGAAGAGAATCAGCTCCTTGGTTCTACCTAGACCCAGAACCTGACATGACCTGGAAAACGAGCTCTACGAATCTGTTCAAGCTTCACTCCCAGACTCCTTCATATGCTACGAATGATGCTGGTTATTTTACTCCAAGTGTAATCTTTGCCAAAGGAGATTTGGTGGTTCCTACACTAATTAGTCGCACGTCTCACACCATTAAGGTGGCAAGAACTTCATCCAACATATTTAAAAAAGCAGGTGCTACATCTCCAGGTTGCACAATTGTTGGGACAAAAAAAACGTTTGTTTAAAATAGCACCAGCAAGCTTTAGAAAAGACCAGAAGGTAAGACCATAAATAGAAGACAGGCAATTATCTGAAAGGCGCTGATGGAAAGGATAGATAACAGGCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105914 lncRNA upstream 14348 23660 ~ 27896 (+) True G93071
TU105912 lncRNA upstream 26343 14060 ~ 15901 (+) True G93070
TU105915 lncRNA downstream 10297 56479 ~ 56936 (+) True G93072
TU105979 lncRNA downstream 83131 129313 ~ 130160 (+) True G93133
TU105931 lncRNA downstream 107781 153963 ~ 154680 (+) True G93086
TU105989 lncRNA downstream 130817 176999 ~ 187671 (+) True G93143
TU105998 lncRNA downstream 136146 182328 ~ 251574 (+) True G93149
CI01000016_00104268_00104615.mRNA mRNA downstream 54355 100537 ~ 105049 (+) True CI01000016_00104268_00104615
CI01000016_00116237_00122376.mRNA mRNA downstream 68981 115163 ~ 123774 (+) True CI01000016_00116237_00122376
CI01000016_00200989_00201760.mRNA mRNA downstream 154539 200721 ~ 202139 (+) True CI01000016_00200989_00201760
CI01000016_00206576_00207640.mRNA mRNA downstream 160394 206576 ~ 207935 (+) True CI01000016_00206576_00207640
CI01000016_00229474_00234707.mRNA mRNA downstream 183240 229422 ~ 234915 (+) True CI01000016_00229474_00234707
TU106281 other downstream 859218 905400 ~ 927532 (+) True G93406
TU108565 other downstream 3815993 3862175 ~ 3862305 (+) True G95439
TU108786 other downstream 4226454 4272636 ~ 4273905 (+) True G95648
TU108629 other downstream 4788376 4834558 ~ 4836655 (+) True G95503
TU108946 other downstream 5173698 5219880 ~ 5225941 (+) True G95792

Expression Profile