RNA id: CI01000016_03064633_03068201.mRNA



Basic Information


Item Value
RNA id CI01000016_03064633_03068201.mRNA
length 1559
RNA type mRNA
GC content 0.36
exon number 2
gene id CI01000016_03064633_03068201
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3064562 ~ 3069092 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGAAAATTAAAAAAAAAAAAAAAAAAAAAAATTATATATATATATATATATATATATGAGCTTTATATGTAAAAATAATTATATTTTAAATAATATATTTACTTTTATTCAGCAAAACAATTTTATTCAGCAAGACACAAATGTAAGAGTATAGAGTTGAACATGGTTAAAAAAAAAAAAAAAAAAAAAAAAAGCACAACTGTTTTTAACACTGACAATAAGAGCACGAAAATCAGAAGGATTTGTCAAGGATCATGTGACTCTGAAGACTGGAGTAATGACGCTGAATATTCAGCTTTGCCATCACAGGAATTAATTACATTTTAAAATATATTAAAATAGAAAATTATTTTAAATTGTAATAATATTTCACAAGATCGCATTTTTACCATATTTTAGAACAAATAAAAAAGCAGCCTTTGTGAGCATATAAGAGACTTATGCTCAATTTATTCCTAAAGTATTCATTTAATCCAGTAAATGCTTCTCACAAAGAGATTATTTTACCATGACACTGAAATTCTGCCAGCTATCTTCAGAGGTTTTGACTAAACTTCCTGTTCTCAAATAAACCCCGCCTGTCATCATATGAATCTGTAAGACTGTGAACAGGAAAAGATAAAAAAAAAAAAAAAAGAAGAAGAAGCAACTCAAGGTTCGCCTGACCACTACAACATTCACACAGGAAAATCTTTCTATTCATAAACAAACAGGTACAGGTCTCATCATTTTACAACCTGAAAAATTATGGACTTTGCTCTGCCTATGTTCAAAATTTAAATGTACTTCTCTGAATACCATTTATGATTTATTAGGTTCTCGGATCAGATCTTGAAGTATCCTGGATAAGTAACACCCTTCCTGTCAAAAAGTGGAAGTCGATCAGCAGTCATGAATCTCACTGATTGTCAGTACCATTTTAAAATGATCATGATAGGTGATAATTGTGTTGGCAAGTCATGCATGCTGAGGCGCTACACAGAGGGCCAGTATTCAGAGATCATAAATGTGACCATTGGAATGAGATTCCGCGATCACATCCTAGAGGTGGAGCCTGGGGTGAGAGTGAATCTACAGATTTGGGATACAGCCGGTCATGAAGTGTTTTGGCGTGCTATCTGCTTTTCCATCCCTCAATCAGCCGGGTGCCTGCTGGTGTTTGACCTGGGCGATTACAAGTCTTTCACTTACATTAAGCATCGGCACATGGAGGTGTGCAATATTGTGCAGCCGCACACTGTGCTCTTCATGCTTGTGGGACACAAGTGTGACAGAAAAGAGCGGGAGGTGAATCAAGATGAAGTGGAAAAGTTTGCAAGTGAATTGGGAGCACCGTACATTGAGGCCTCGGCCAAAACAGGCCACAATGTGGCAGAAGCTTTTGAACTGTTGACCCGGCGCATTTATCAGGGCTATCTGAGTGGAGAAGTGCGCTTGCATGAGAGCTGGGGAAAGATCCATAAAAACAATAAATGCTGTGCCTCATAAAGTCAACATGAAACTGCATGTTTTCCATATTATGACCATTCAAACGTAACCATGTATTTTGACCAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108308 lncRNA downstream 13836 3049891 ~ 3050726 (-) True G95191
TU108316 lncRNA downstream 20696 3043667 ~ 3043866 (-) True G95199
TU108293 lncRNA downstream 45492 3018794 ~ 3019070 (-) True G95181
TU108284 lncRNA downstream 186823 2877531 ~ 2877739 (-) True G95172
TU108278 lncRNA downstream 199431 2864769 ~ 2865131 (-) True G95166
TU108320 lncRNA upstream 22273 3091365 ~ 3091751 (-) True G95203
TU108327 lncRNA upstream 36668 3105760 ~ 3106448 (-) True G95210
TU108429 lncRNA upstream 252988 3322080 ~ 3322366 (-) True CI01000016_03322103_03326683
TU108430 lncRNA upstream 255275 3324367 ~ 3324682 (-) True G95313
TU108432 lncRNA upstream 256820 3325912 ~ 3326175 (-) True G95315
CI01000016_03062846_03063013.mRNA mRNA downstream 1290 3062846 ~ 3063272 (-) True CI01000016_03062846_03063013
CI01000016_03060171_03060612.mRNA mRNA downstream 3950 3059543 ~ 3060612 (-) True CI01000016_03060171_03060612
CI01000016_02991852_02994428.mRNA mRNA downstream 70134 2991220 ~ 2994428 (-) True CI01000016_02991852_02994428
CI01000016_02936606_02957342.mRNA mRNA downstream 106687 2936109 ~ 2957875 (-) True CI01000016_02936606_02957342
CI01000016_02884294_02912568.mRNA mRNA downstream 151994 2882846 ~ 2912568 (-) True CI01000016_02884294_02912568
CI01000016_03072793_03080040.mRNA mRNA upstream 3636 3072728 ~ 3080040 (-) True CI01000016_03072793_03080040
CI01000016_03082653_03084658.mRNA mRNA upstream 13294 3082386 ~ 3084658 (-) True CI01000016_03082653_03084658
CI01000016_03322103_03326683.mRNA mRNA upstream 252911 3322003 ~ 3330762 (-) False CI01000016_03322103_03326683
CI01000016_03555967_03558776.mRNA mRNA upstream 486208 3555300 ~ 3559186 (-) True CI01000016_03555967_03558776
CI01000016_03647744_03675574.mRNA mRNA upstream 578561 3647653 ~ 3675585 (-) False CI01000016_03647744_03675574
TU108180 other downstream 78921 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 788287 2270836 ~ 2276275 (-) True G94786
TU109910 other upstream 566515 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 796669 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 1843616 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 2256427 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 2343167 5415682 ~ 5418217 (-) True G97020

Expression Profile