RNA id: CI01000016_04696937_04698098.mRNA



Basic Information


Item Value
RNA id CI01000016_04696937_04698098.mRNA
length 1132
RNA type mRNA
GC content 0.44
exon number 2
gene id CI01000016_04696937_04698098
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4696685 ~ 4698618 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGGCCCGCAGAGCACTGTAGGAAGTGTATATGGTGGGAGTGTGTGGTGATGTTATTCATAGTTCACTGGGCTGTTTAAGGGCACATCCCTATTCGGTTTCAGGTGATGGAGGGAGTCGGATCGTCCCAATCCTCACACAATAAAGGTTACACAATAGGAAACAAAACAAATGAGTGGAACTTTATCTAATGGGCAGTGACAGAGTAAGGTGGGCGTCACAGCAATAAAAGGCTCATATTGTCTGCAAAGCAAAAACACATGTACGATCACTTCAAGCGTACCATGTTACATGACCGGCAAAACAAACCAGCTTAAAACCTTTTAAGCCTAAACAACTGTTAAAGATTCATTCCAAATGCTCACTCATGCACACACTCACACAGCAAGAATAAAAATACTCACAGAATGAAGCAGACCTTGTCAGGAACAGGGTGCCATGGATTGCCGTGGTAACAAGTGAATGCAGTCCTCTGGGGAATCGCAACACGTCTTCTAGGATGACAGGTTGAAAGTCACAGAAATGGAGTGGTGTGGAGAGTCTCAAAGGAGAAGCTATCCCTCCAATTCCCACGGCTCCTCCCTTCAGGAGTTCAGGAATGAGCTTTGGCACACCAGACACTCCCTCTCTCCTCCGAATGGCACCTCTAGGACAGAGGTGGGTCGAGTTATGGCTGCTCTGAGGTCCGTGGAAGCAAACAGAGCTGAGGCTGACGCCAGGGAGAGGAGGGGCGTCACATCTGTCGCCACGCTGAGAATTTCCTCATCAGCTCATCAGAGTCTTGTGGCCTTGCGTTGCTTAAGACCTGAGGAAAAACAGCGAGAAATATTCACAATCAATTATTCATTATACTGTAGTACAGACGGCAACCTTCAATACTGATATGACTACTACGAGGGAGTTTTGAAACACCATACAGATTTTTATGAATTAAAACCACAGTTTCATTATAGTACTTACCGGCTCACATTAGTCACAATAGTAATTCAGTTACACCACGCATTTATATTACAGTATATACCAGTGTCAATATAATTCATGTAATGTTATTGAATGGATGTGCTCATACGTGACAAGACAATTACATTGCAATCAATATCCAATCAAAACACAGTCTCATTATCACACAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110356 lncRNA downstream 9571 4686861 ~ 4687114 (-) True G96983
TU110350 lncRNA downstream 31703 4664759 ~ 4664982 (-) True G96977
TU110272 lncRNA downstream 42288 4649487 ~ 4654397 (-) True G96916
TU110280 lncRNA downstream 67404 4628038 ~ 4629281 (-) True G96921
TU110269 lncRNA downstream 69244 4625440 ~ 4627441 (-) True G96915
TU110426 lncRNA upstream 118012 4816630 ~ 4897720 (-) True G97050
TU110447 lncRNA upstream 153482 4852100 ~ 4853062 (-) True G97069
TU110454 lncRNA upstream 178726 4877344 ~ 4877782 (-) True G97074
TU110471 lncRNA upstream 258583 4957201 ~ 4957444 (-) True G97091
TU110472 lncRNA upstream 258899 4957517 ~ 4957738 (-) True G97092
CI01000016_04636548_04646848.mRNA mRNA downstream 49769 4635827 ~ 4646916 (-) True CI01000016_04636548_04646848
CI01000016_04422169_04424433.mRNA mRNA downstream 272252 4421995 ~ 4424433 (-) True CI01000016_04422169_04424433
CI01000016_04385978_04389107.mRNA mRNA downstream 306615 4385722 ~ 4390070 (-) True CI01000016_04385978_04389107
CI01000016_04370577_04377413.mRNA mRNA downstream 318568 4370042 ~ 4378117 (-) True CI01000016_04370577_04377413
CI01000016_04333323_04333836.mRNA mRNA downstream 362849 4332873 ~ 4333836 (-) True CI01000016_04333323_04333836
CI01000016_04802496_04812976.mRNA mRNA upstream 103836 4802454 ~ 4813266 (-) True CI01000016_04802496_04812976
CI01000016_04921091_04922518.mRNA mRNA upstream 222250 4920868 ~ 4922518 (-) False CI01000016_04921091_04922518
CI01000016_04927541_04930989.mRNA mRNA upstream 227476 4926094 ~ 4930989 (-) True CI01000016_04927541_04930989
CI01000016_04936283_04939240.mRNA mRNA upstream 237395 4936013 ~ 4939240 (-) True CI01000016_04936283_04939240
CI01000016_04971399_04981029.mRNA mRNA upstream 272724 4971342 ~ 4981400 (-) True CI01000016_04971399_04981029
TU110003 other downstream 765634 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 1031372 3635607 ~ 3665313 (-) True G96628
TU108180 other downstream 1711044 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 2420410 2270836 ~ 2276275 (-) True G94786
TU110416 other upstream 214090 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 626901 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 713641 5415682 ~ 5418217 (-) True G97020
TU110786 other upstream 1460368 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 4190215 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496

Expression Profile