RNA id: CI01000016_04802496_04812976.mRNA



Basic Information


Item Value
RNA id CI01000016_04802496_04812976.mRNA
length 1193
RNA type mRNA
GC content 0.41
exon number 7
gene id CI01000016_04802496_04812976
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4802454 ~ 4813266 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AATCTTTTTATGCAATGTAAAGATAAAGATACTTTAGATGTAATCTTATTTTAAAATAATAAATCAATTATAAAATTGTTATGAAATCAATTATTTGTCATTTTCTTCCAATTAAAGTCATTAAATGTGAATAATTAGAAATTAAAAAGTGCACACCACAGAGTGAGTCACATTAGACAGCTGTTTTTAACTTCCCTTTATGTCTTTGAACAGTTTGAACTTCTTTTATGAGATGGACTGCTGTTAACACGAGTCACTTTAGAAATTAAAGCTCATTATGGACTTACATAATGTATTTATTCCTTTACTGCTGTCTTGTGCCACTGGGTTTACAGGTTACTGGGTACCAGGGTCATGATGTCACACTGTTGTGCCAGTACATCCATGGAAACTCAAAGGACAACATATCGCAAGTACAGTGGATGTGGAACAATCGGTCCAATAAATATGAAATCATGATCTTTAATATGGACCATGGTCTTTTTCTGCATGACACATTTCTGAAAGACAGAGTCAGCTTCATTAAGAGCTCTCCTCTGATCTATGACGCCTCCATCATCATCAGAGACGTGAGGATGAGTGATCAGGGAGTCTACAGCTGTGACTACACAGCCTTCCCTAGCGGCAGTTATAAAGGACAAACCACTCTTAAAGTGAGAGAAGGCAGTCCTCCTATTCTTTCCACCGCTGAGGCTGTAGGGATTGTGACTGCAGTAGTGCTCATCACTATAATTACAGCTGCTGTGGGGTATTTATTCCTGATCAACAGACGAACTCATGGTAGAAGAGCCGGCAACACTTCCGCTTATTATACAACTCAGACACTTGATGACCTACAACAGGATGTCACATATGCTGATGCCACAATACTGAAAAGAGGCAAAGTCAACAGAAGCACCTTGCCATCTGGGGACATTGAATACGCTGCGGTTTGCTTCAGTGGTCGCTCAGAATCAACGTCACTGCGAGCCTCAACCAATCAGCTGGCTTTAGATGTCCACACACCAGAGGAGGAAACTGTGTACGCACAGCGTGTGCAGATTTGGGCTGAGGTATGTGGTGTGATTTCCAGCACTGTTTACGAACTCACAAGTTCTTGCAGACCGATCAAAGTCCACGTTTTAATGAACACAGCTCCTCATGTCCAATAACACACATATTCAGGCAGAATTGATCTCCTCGGTATCAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110356 lncRNA downstream 115340 4686861 ~ 4687114 (-) True G96983
TU110350 lncRNA downstream 137472 4664759 ~ 4664982 (-) True G96977
TU110272 lncRNA downstream 148057 4649487 ~ 4654397 (-) True G96916
TU110280 lncRNA downstream 173173 4628038 ~ 4629281 (-) True G96921
TU110269 lncRNA downstream 175013 4625440 ~ 4627441 (-) True G96915
TU110426 lncRNA upstream 3364 4816630 ~ 4897720 (-) True G97050
TU110447 lncRNA upstream 38834 4852100 ~ 4853062 (-) True G97069
TU110454 lncRNA upstream 64078 4877344 ~ 4877782 (-) True G97074
TU110471 lncRNA upstream 143935 4957201 ~ 4957444 (-) True G97091
TU110472 lncRNA upstream 144251 4957517 ~ 4957738 (-) True G97092
CI01000016_04696937_04698098.mRNA mRNA downstream 103836 4696685 ~ 4698618 (-) True CI01000016_04696937_04698098
CI01000016_04636548_04646848.mRNA mRNA downstream 155538 4635827 ~ 4646916 (-) True CI01000016_04636548_04646848
CI01000016_04422169_04424433.mRNA mRNA downstream 378021 4421995 ~ 4424433 (-) True CI01000016_04422169_04424433
CI01000016_04385978_04389107.mRNA mRNA downstream 412384 4385722 ~ 4390070 (-) True CI01000016_04385978_04389107
CI01000016_04370577_04377413.mRNA mRNA downstream 424337 4370042 ~ 4378117 (-) True CI01000016_04370577_04377413
CI01000016_04921091_04922518.mRNA mRNA upstream 107602 4920868 ~ 4922518 (-) False CI01000016_04921091_04922518
CI01000016_04927541_04930989.mRNA mRNA upstream 112828 4926094 ~ 4930989 (-) True CI01000016_04927541_04930989
CI01000016_04936283_04939240.mRNA mRNA upstream 122747 4936013 ~ 4939240 (-) True CI01000016_04936283_04939240
CI01000016_04971399_04981029.mRNA mRNA upstream 158076 4971342 ~ 4981400 (-) True CI01000016_04971399_04981029
CI01000016_04995532_04996727.mRNA mRNA upstream 181546 4994812 ~ 4996727 (-) True CI01000016_04995532_04996727
TU110003 other downstream 871403 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 1137141 3635607 ~ 3665313 (-) True G96628
TU108180 other downstream 1816813 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 2526179 2270836 ~ 2276275 (-) True G94786
TU110416 other upstream 99442 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 512253 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 598993 5415682 ~ 5418217 (-) True G97020
TU110786 other upstream 1345720 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 4075567 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496

Expression Profile