RNA id: TCONS_00014442


Basic Information

Item Value
RNA id TCONS_00014442
length 452
RNA type processed_transcript
GC content 0.45
exon number 4
gene id XLOC_007327
representative False

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 26796684 ~ 26843597 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAAAGTTAAGTCAGGCAGTATTCTGTAGTTAGAAGCTGAGGAGTACAGACAAACACATTTTTCTTTTGTTCAAACGGTTGGCTTTGAGCAGTTTCTCTAGGATGAGCTCCAACTGCTCAGATGAGTTTTTCCAGGCCACAAATCATGCGGAACAGACCTTTCGAAAGATGGAAACCTATCTTCAGCACAAGCAGCTGTGTGATGTACTTTTGATAGCTGGAGATCACAAGATCCCTGCACACAGACTTGTCCTGAGTGCAGTTTCAGACTACTTTGCTGCCATGTTCACCAATGATGTGAGGGAGGCCAAACAAGAGGAAATTAAAATGGAGGGTGTTGATCCTGAGGCGCTGAGAGCACTGGTTCATTTTGCATATACTGGAGTCCTGGAGCTAAAAGAGGAGACGATTGAAAGTCTTTTAGCTGCCGCTTGTCTCCTCCAGCTCTCACAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070410-63 Is expressed in intermediate cell mass of mesoderm. Orthologous to human KLHL4 (kelch like family member 4).

Ensembl:

ensembl_id ENSDART00000135061

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00014437 lncRNA upstream 79169 26715651 ~ 26717735 (+) True XLOC_007324
TCONS_00015975 lncRNA upstream 94552 26634727 ~ 26702352 (+) True XLOC_007323
TCONS_00014435 lncRNA upstream 203248 26590914 ~ 26593656 (+) True XLOC_007322
TCONS_00016224 lncRNA upstream 291420 26504179 ~ 26505484 (+) True XLOC_007320
TCONS_00016222 lncRNA upstream 444262 26272102 ~ 26352642 (+) False XLOC_007318
TCONS_00015976 lncRNA downstream 699855 27530421 ~ 27530786 (+) False XLOC_007328
TCONS_00016225 lncRNA downstream 699933 27530499 ~ 27537360 (+) True XLOC_007328
TCONS_00015977 lncRNA downstream 733832 27564398 ~ 27584043 (+) False XLOC_007329
TCONS_00015978 lncRNA downstream 733832 27564398 ~ 27705228 (+) False XLOC_007329
TCONS_00015979 lncRNA downstream 733832 27564398 ~ 27715424 (+) True XLOC_007329
TCONS_00014440 mRNA upstream 570 26759332 ~ 26796334 (+) True XLOC_007326
TCONS_00014438 mRNA upstream 67615 26719691 ~ 26729289 (+) False XLOC_007325
TCONS_00014439 mRNA upstream 67655 26719731 ~ 26729249 (+) True XLOC_007325
TCONS_00014436 mRNA upstream 77851 26715626 ~ 26719053 (+) False XLOC_007324
TCONS_00014434 mRNA upstream 170774 26566936 ~ 26626130 (+) False XLOC_007322
TCONS_00014446 mRNA downstream 1451178 28281744 ~ 28385565 (+) True XLOC_007333
TCONS_00014447 mRNA downstream 1602171 28432737 ~ 28437426 (+) True XLOC_007334
TCONS_00014448 mRNA downstream 1608381 28438947 ~ 28459446 (+) False XLOC_007335
TCONS_00014449 mRNA downstream 1612397 28442963 ~ 28457955 (+) True XLOC_007335
TCONS_00014450 mRNA downstream 1634170 28464736 ~ 28469244 (+) True XLOC_007337
TCONS_00014405 other upstream 2439387 24357400 ~ 24357517 (+) True XLOC_007298
TCONS_00014372 other upstream 3424432 23187112 ~ 23372472 (+) True XLOC_007280
TCONS_00014367 other upstream 3641248 23076127 ~ 23155656 (+) False XLOC_007280
TCONS_00014351 other upstream 4477903 22316234 ~ 22319001 (+) False XLOC_007271
TCONS_00014324 other upstream 5051420 21739616 ~ 21745484 (+) True XLOC_007257
TCONS_00014490 other downstream 3583211 30413777 ~ 30424854 (+) False XLOC_007352
TCONS_00014495 other downstream 3757401 30587967 ~ 30620257 (+) False XLOC_007356
TCONS_00014499 other downstream 3910422 30740988 ~ 30741116 (+) True XLOC_007359
TCONS_00014522 other downstream 4679375 31509941 ~ 31519774 (+) True XLOC_007368
TCONS_00014524 other downstream 4702517 31533083 ~ 31533220 (+) True XLOC_007370

Expression Profile

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