RNA id: TU106091



Basic Information


Item Value
RNA id TU106091
length 612
lncRNA type sense_over
GC content 0.38
exon number 2
gene id G93224
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 309289 ~ 368179 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTTTTTTTTTTTTTTTTTTTTTAAATGCGCGGCTTGTCAATGAACTATGGCTCCAAATGCTAATCCATCTGAAAGCACTGCGAGTTTGAATCGCTTATAATGTGCATTTGAAAAAGCAACACACGTCAAACATCTTTCCAGACATGAGAAGCATTTATTAACATATTGTCCAACAAAAGACAACATTTAATAACACGTGTTTACTCCAAACTCACTTCATAACGACAGTTGAGCATCGTTCTGTGAGATGATGTGGCTTCTTACACAGAATAAGGCAGTCGTGTGTTTATTAGTCATGTTTAATCAATCAAAACATTTCAATCTTCTGTTTATTCAGCTACAGCGATAGTATGGGATTTCCTGGAATGACGCGTTTTACTTCGGCAGCAGGGCATATTTGCAGTTTCTGCGCGAGAACGCCCTCTGGCTTTCAGATGGAGAAACATTTACTACTGATCACAGTGCCGTACAGCTCTGACAAGCTGCACATAAAATAATCGCAGCCTTTGCCAAATCACGTGCGATAAAATTGCGATAAATCATGCAGCCCTATTTTTGTGCATTTTGACAACATTGAAAGTTTACTGAAAATAATTGAGCAACGTAAGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106082 lncRNA upstream 24439 284593 ~ 284850 (+) True G93216
TU106081 lncRNA upstream 24856 284200 ~ 284433 (+) True G93215
TU105998 lncRNA upstream 57715 182328 ~ 251574 (+) True G93149
TU105989 lncRNA upstream 121618 176999 ~ 187671 (+) True G93143
TU105931 lncRNA upstream 154609 153963 ~ 154680 (+) True G93086
TU106007 lncRNA downstream 82434 450613 ~ 457007 (+) True G93157
TU106015 lncRNA downstream 92261 460440 ~ 463979 (+) True G93161
TU106157 lncRNA downstream 249253 617432 ~ 617962 (+) True G93290
TU106167 lncRNA downstream 265923 634102 ~ 634319 (+) True G93300
TU106168 lncRNA downstream 271482 639661 ~ 639878 (+) True G93301
CI01000016_00294886_00298452.mRNA mRNA upstream 10128 294886 ~ 299161 (+) True CI01000016_00294886_00298452
CI01000016_00229474_00234707.mRNA mRNA upstream 74374 229422 ~ 234915 (+) True CI01000016_00229474_00234707
CI01000016_00206576_00207640.mRNA mRNA upstream 101354 206576 ~ 207935 (+) True CI01000016_00206576_00207640
CI01000016_00200989_00201760.mRNA mRNA upstream 107150 200721 ~ 202139 (+) True CI01000016_00200989_00201760
CI01000016_00116237_00122376.mRNA mRNA upstream 185515 115163 ~ 123774 (+) True CI01000016_00116237_00122376
CI01000016_00496095_00506965.mRNA mRNA downstream 127916 496095 ~ 507033 (+) True CI01000016_00496095_00506965
CI01000016_00540871_00541608.mRNA mRNA downstream 172453 540632 ~ 541723 (+) True CI01000016_00540871_00541608
CI01000016_00569502_00581271.mRNA mRNA downstream 201323 569502 ~ 581499 (+) True CI01000016_00569502_00581271
CI01000016_00772375_00772848.mRNA mRNA downstream 404091 772270 ~ 772889 (+) True CI01000016_00772375_00772848
CI01000016_00885996_00887374.mRNA mRNA downstream 517817 885996 ~ 887478 (+) True CI01000016_00885996_00887374
TU106281 other downstream 537221 905400 ~ 927532 (+) True G93406
TU108565 other downstream 3493996 3862175 ~ 3862305 (+) True G95439
TU108786 other downstream 3904457 4272636 ~ 4273905 (+) True G95648
TU108629 other downstream 4466379 4834558 ~ 4836655 (+) True G95503
TU108946 other downstream 4851701 5219880 ~ 5225941 (+) True G95792

Expression Profile