Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU106367 |
| length | 1188 |
| lncRNA type | antisense_over |
| GC content | 0.40 |
| exon number | 6 |
| gene id | G93483 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 1340452 ~ 1342798 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU106382 | lncRNA | upstream | 78245 | 1261920 ~ 1262207 (+) | True | G93497 |
| TU106332 | lncRNA | upstream | 104606 | 1228198 ~ 1235846 (+) | True | G93449 |
| TU106360 | lncRNA | upstream | 127831 | 1212344 ~ 1212621 (+) | True | G93476 |
| TU106322 | lncRNA | upstream | 142079 | 1195710 ~ 1198373 (+) | True | G93442 |
| TU106312 | lncRNA | upstream | 255685 | 1084467 ~ 1084767 (+) | True | G93434 |
| TU106433 | lncRNA | downstream | 51900 | 1394698 ~ 1449594 (+) | True | G93547 |
| TU106486 | lncRNA | downstream | 78822 | 1421620 ~ 1449437 (+) | True | G93598 |
| TU106455 | lncRNA | downstream | 118802 | 1461600 ~ 1461978 (+) | True | G93567 |
| TU106453 | lncRNA | downstream | 119319 | 1462117 ~ 1469355 (+) | True | G93565 |
| TU106512 | lncRNA | downstream | 153595 | 1496393 ~ 1554026 (+) | True | G93624 |
| CI01000016_01277792_01304615.mRNA | mRNA | upstream | 35690 | 1276928 ~ 1304762 (+) | True | CI01000016_01277792_01304615 |
| CI01000016_01253760_01273553.mRNA | mRNA | upstream | 66499 | 1253406 ~ 1273953 (+) | True | CI01000016_01253760_01273553 |
| CI01000016_01238151_01242924.mRNA | mRNA | upstream | 97492 | 1237991 ~ 1242960 (+) | True | CI01000016_01238151_01242924 |
| CI01000016_01217119_01220858.mRNA | mRNA | upstream | 118515 | 1217119 ~ 1221937 (+) | True | CI01000016_01217119_01220858 |
| CI01000016_01183747_01191853.mRNA | mRNA | upstream | 147594 | 1183747 ~ 1192858 (+) | True | CI01000016_01183747_01191853 |
| CI01000016_01408124_01408966.mRNA | mRNA | downstream | 63838 | 1406636 ~ 1409165 (+) | True | CI01000016_01408124_01408966 |
| CI01000016_01476236_01476607.mRNA | mRNA | downstream | 133438 | 1476236 ~ 1476762 (+) | True | CI01000016_01476236_01476607 |
| CI01000016_01509959_01560806.mRNA | mRNA | downstream | 167161 | 1509959 ~ 1561122 (+) | True | CI01000016_01509959_01560806 |
| CI01000016_01563821_01567070.mRNA | mRNA | downstream | 219600 | 1562398 ~ 1567529 (+) | True | CI01000016_01563821_01567070 |
| CI01000016_01588035_01601276.mRNA | mRNA | downstream | 244272 | 1587070 ~ 1601909 (+) | True | CI01000016_01588035_01601276 |
| TU106281 | other | upstream | 412920 | 905400 ~ 927532 (+) | True | G93406 |
| TU108565 | other | downstream | 2519377 | 3862175 ~ 3862305 (+) | True | G95439 |
| TU108786 | other | downstream | 2929838 | 4272636 ~ 4273905 (+) | True | G95648 |
| TU108629 | other | downstream | 3491760 | 4834558 ~ 4836655 (+) | True | G95503 |
| TU108946 | other | downstream | 3877082 | 5219880 ~ 5225941 (+) | True | G95792 |
| TU109033 | other | downstream | 4063071 | 5405869 ~ 5407863 (+) | False | CI01000016_05405791_05407797 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00020113 | False | 504 | mRNA | 0.43 | 5 | NC_007127.7 | 38940758 ~ 38943685 (+) |
| tiger barb (Puntius tetrazona) | TU170138 | False | 552 | TUCP | 0.44 | 5 | NC_056714.1 | 22087649 ~ 22089054 (-) |
