RNA id: TU107657


Basic Information

Item Value
RNA id TU107657
length 773
lncRNA type antisense_over
GC content 0.34
exon number 2
gene id G94634
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2072464 ~ 2078409 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATATATATATATACAAACTTTTATGTTAGATGCGATTAATCACGGTTAATCGATTTGACAGCACTAATTATGATATTATATTATATACAAAAGGGTAAGATGTGGAGTGATTAATGTAAATTCGTACACTAAGGTTGGTTTTATCGCTGCCTCCTGACGACACACTCCATCTCTTCCCAGGCTTCCCATCCACTGGGGGAGAATCTCTGTCCTTCTCTGCATGCTGCAGCTTCCTGTTTAAGTCCTGGAACATGTCCTGGTGGCGCTTCCGTGTATGCATGATCTTCTGCAAGACAAAACCCGACTTAAAACCTTTGCAGAGATGAATGAATCTGCACCACACAAGACTGCTGTCATTTGTGGAAAGATTTACATTACACTGACCTCAAAGTCCAGCTCTGCATAGCGTGATTTTCGTCTCTAAAAGGACAAATAAGAATAAAGGATGTTATTGTGTGTCCTTCCAGAGTGGTCTTAGGGAAAAGACAGCAAATGGGTCATTCCCAAAATAAAGTGATAAACATGTCCTTAGACATTTTAGTCATAAATAAGATTTCAAATATATATATATATAAACTCTGTATAAAAGACAACATTCTATAACCTAATATTCCAATACATAATATAATGGTTTAATGTTGAACAATCCATGTTGAACAATTTATTCATTTATACTCATTTTTGTGTTTCCAGTTTAAACATTAGTGCATGAAGCAAAAAAATTTTTTTTTAATTAACATTTAAAACAAACTAATATAAAAGCAATTAATGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107462 lncRNA downstream 130154 1797629 ~ 1826281 (-) True G94460
TU107517 lncRNA downstream 334891 1733079 ~ 1737573 (-) True G94510
TU107450 lncRNA downstream 448462 1623032 ~ 1624002 (-) True G94449
TU107435 lncRNA downstream 504182 1568055 ~ 1568282 (-) True G94434
TU107434 lncRNA downstream 506813 1565320 ~ 1565651 (-) True G94433
TU107697 lncRNA upstream 71954 2150363 ~ 2150589 (-) True G94674
TU107788 lncRNA upstream 101845 2180254 ~ 2180460 (-) True G94748
TU107791 lncRNA upstream 118856 2197265 ~ 2197495 (-) True G94751
TU107815 lncRNA upstream 163814 2242223 ~ 2249672 (-) True G94768
TU107863 lncRNA upstream 354783 2433192 ~ 2446161 (-) False G94796
CI01000016_01835869_01947822.mRNA mRNA downstream 124622 1835745 ~ 1947842 (-) False CI01000016_01835869_01947822
CI01000016_01689633_01693021.mRNA mRNA downstream 378792 1689495 ~ 1693672 (-) True CI01000016_01689633_01693021
CI01000016_01659416_01671969.mRNA mRNA downstream 400495 1658974 ~ 1671969 (-) True CI01000016_01659416_01671969
CI01000016_01653014_01654553.mRNA mRNA downstream 417905 1652387 ~ 1654559 (-) True CI01000016_01653014_01654553
CI01000016_01577710_01581289.mRNA mRNA downstream 490785 1576406 ~ 1581679 (-) True CI01000016_01577710_01581289
CI01000016_02120276_02136906.mRNA mRNA upstream 41747 2120156 ~ 2137185 (-) True CI01000016_02120276_02136906
CI01000016_02263634_02265929.mRNA mRNA upstream 184836 2263245 ~ 2265929 (-) True CI01000016_02263634_02265929
CI01000016_02288848_02311105.mRNA mRNA upstream 208888 2287297 ~ 2311105 (-) True CI01000016_02288848_02311105
CI01000016_02328065_02334778.mRNA mRNA upstream 249403 2327812 ~ 2335736 (-) True CI01000016_02328065_02334778
CI01000016_02467451_02477544.mRNA mRNA upstream 389042 2467451 ~ 2477544 (-) True CI01000016_02467451_02477544
TU107853 other upstream 192427 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 906851 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 1557198 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 1787352 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 2834299 4912708 ~ 4923404 (-) True G97040

Expression Profile