RNA id: TU107788



Basic Information


Item Value
RNA id TU107788
length 207
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G94748
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2180254 ~ 2180460 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTTTTTTAATCCCCATAAATCATAAGCAATGTCTCAGAATAAGCCGTTTGCAGTTTCCATGCAATGTGAGCATTTAACAGCAGAATTCAACAGCAGAATTTAACAGCAGCATTCAAGTAAGAAATGTAGATGCAGATATAAACTTTCATTGTGATGAAAAAATGAAAGCTCTAGCGTAAGTTCTGCCAGGAAGACTCAATGTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107697 lncRNA downstream 29665 2150363 ~ 2150589 (-) True G94674
TU107657 lncRNA downstream 101845 2072464 ~ 2078409 (-) True G94634
TU107462 lncRNA downstream 237944 1797629 ~ 1826281 (-) True G94460
TU107517 lncRNA downstream 442681 1733079 ~ 1737573 (-) True G94510
TU107450 lncRNA downstream 556252 1623032 ~ 1624002 (-) True G94449
TU107791 lncRNA upstream 16805 2197265 ~ 2197495 (-) True G94751
TU107815 lncRNA upstream 61763 2242223 ~ 2249672 (-) True G94768
TU107863 lncRNA upstream 252732 2433192 ~ 2446161 (-) False G94796
TU107864 lncRNA upstream 252732 2433192 ~ 2446161 (-) False G94796
TU107866 lncRNA upstream 252732 2433192 ~ 2446161 (-) True G94796
CI01000016_02120276_02136906.mRNA mRNA downstream 43069 2120156 ~ 2137185 (-) True CI01000016_02120276_02136906
CI01000016_01835869_01947822.mRNA mRNA downstream 232412 1835745 ~ 1947842 (-) False CI01000016_01835869_01947822
CI01000016_01689633_01693021.mRNA mRNA downstream 486582 1689495 ~ 1693672 (-) True CI01000016_01689633_01693021
CI01000016_01659416_01671969.mRNA mRNA downstream 508285 1658974 ~ 1671969 (-) True CI01000016_01659416_01671969
CI01000016_01653014_01654553.mRNA mRNA downstream 525695 1652387 ~ 1654559 (-) True CI01000016_01653014_01654553
CI01000016_02263634_02265929.mRNA mRNA upstream 82785 2263245 ~ 2265929 (-) True CI01000016_02263634_02265929
CI01000016_02288848_02311105.mRNA mRNA upstream 106837 2287297 ~ 2311105 (-) True CI01000016_02288848_02311105
CI01000016_02328065_02334778.mRNA mRNA upstream 147352 2327812 ~ 2335736 (-) True CI01000016_02328065_02334778
CI01000016_02467451_02477544.mRNA mRNA upstream 286991 2467451 ~ 2477544 (-) True CI01000016_02467451_02477544
CI01000016_02568824_02575674.mRNA mRNA upstream 388150 2568610 ~ 2575674 (-) True CI01000016_02568824_02575674
TU107853 other upstream 90376 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 804800 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 1455147 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 1685301 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 2732248 4912708 ~ 4923404 (-) True G97040

Expression Profile