RNA id: TU108261


Basic Information

Item Value
RNA id TU108261
length 458
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G95149
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2772035 ~ 2772492 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTACTGTCACATGACCTACGAGCGTCAGTTACGTCCCTTCAACTCCATTCACAAATCCTCTCCCGTGGCCTCATGGGATAGTAAAGTGTCCATCATATGCGCACTTCAGAATCTCACCAGAAGTAGTATGTCATCCGGGTACATTTCACCTACTGTTTTTCTAATACTATGAATTCGGACATACTACTCTGTTTGCATACTGTTTTTCACGTACTATATAGTAGAGAAGAATTCGATTTCGGACGCAGCGACTGTCAGCGGCACGGAAGCAGACAGTACGCGAGTGGCGAGCACCGTTCGCTCTCATTAATGCATTCAAATAAATGTACTGGTACTGTGCTAATTTACCTGTATCTGTTTTACAACGAGCAGAAATCTGTAAGAAATGTTACAAACCATAGATAAAATAACTGCAGAAAGTGAGCTATGTCAGATCACTCTTTCAATAGGAAAAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108260 lncRNA downstream 404 2771403 ~ 2771631 (-) True G95148
TU108259 lncRNA downstream 1557 2770056 ~ 2770478 (-) True G95147
TU108258 lncRNA downstream 2827 2768938 ~ 2769208 (-) True G95146
TU108257 lncRNA downstream 4760 2767055 ~ 2767275 (-) True G95145
TU108255 lncRNA downstream 8696 2763135 ~ 2763339 (-) True G95143
TU108262 lncRNA upstream 10 2772502 ~ 2772717 (-) True G95150
TU108263 lncRNA upstream 766 2773258 ~ 2773503 (-) True G95151
TU108264 lncRNA upstream 1018 2773510 ~ 2773718 (-) True G95152
TU108265 lncRNA upstream 2102 2774594 ~ 2775029 (-) True G95153
TU108266 lncRNA upstream 2953 2775445 ~ 2775866 (-) True G95154
CI01000016_02679833_02695963.mRNA mRNA downstream 76072 2678538 ~ 2695963 (-) True CI01000016_02679833_02695963
CI01000016_02589744_02622875.mRNA mRNA downstream 149160 2589475 ~ 2622875 (-) True CI01000016_02589744_02622875
CI01000016_02568824_02575674.mRNA mRNA downstream 196361 2568610 ~ 2575674 (-) True CI01000016_02568824_02575674
CI01000016_02467451_02477544.mRNA mRNA downstream 294491 2467451 ~ 2477544 (-) True CI01000016_02467451_02477544
CI01000016_02328065_02334778.mRNA mRNA downstream 436299 2327812 ~ 2335736 (-) True CI01000016_02328065_02334778
CI01000016_02802780_02815803.mRNA mRNA upstream 30107 2802599 ~ 2815803 (-) True CI01000016_02802780_02815803
CI01000016_02817855_02829699.mRNA mRNA upstream 45363 2817855 ~ 2830457 (-) True CI01000016_02817855_02829699
CI01000016_02884294_02912568.mRNA mRNA upstream 110354 2882846 ~ 2912568 (-) True CI01000016_02884294_02912568
CI01000016_02936606_02957342.mRNA mRNA upstream 163617 2936109 ~ 2957875 (-) True CI01000016_02936606_02957342
CI01000016_02991852_02994428.mRNA mRNA upstream 218728 2991220 ~ 2994428 (-) True CI01000016_02991852_02994428
TU107853 other downstream 495760 2270836 ~ 2276275 (-) True G94786
TU108180 other upstream 212768 2985260 ~ 2985641 (-) True G95070
TU109910 other upstream 863115 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 1093269 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 2140216 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 2553027 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265

Expression Profile