RNA id: TU108513



Basic Information


Item Value
RNA id TU108513
length 283
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G95387
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3411239 ~ 3411521 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTGCAAAGCAACTATAGTGTTATAAGGGGTATTTTAGGTATAACATTATTTATTGTTGGTTGCTCCGTACCCGAGACAAACCGCAGGATGCGTGCCATGTTGCAATGCAAGTGTTTATTATTACAAAGGCCAAGGTGAGAAAGTAAAGGGAGGATAAATAGAAGATAAAGAAAATTATTTACAGTATTTACAATTCCCCAGGTCAGTTTGGGGATTAATCCAACACACAACAAAAGGGGAAAACGGGACGCAGCCGTCGCCAGATCAAAGAAATAAATAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108506 lncRNA downstream 4537 3406432 ~ 3406702 (-) True G95380
TU108500 lncRNA downstream 6379 3399530 ~ 3404860 (-) True G95376
TU108502 lncRNA downstream 10282 3398182 ~ 3400957 (-) False G95376
TU108432 lncRNA downstream 85064 3325912 ~ 3326175 (-) True G95315
TU108430 lncRNA downstream 86557 3324367 ~ 3324682 (-) True G95313
TU109836 lncRNA upstream 24689 3436210 ~ 3437197 (-) True G96569
TU109864 lncRNA upstream 99782 3511303 ~ 3511652 (-) True G96592
TU109869 lncRNA upstream 117030 3528551 ~ 3528890 (-) True G96597
TU109871 lncRNA upstream 119054 3530575 ~ 3530946 (-) True G96599
TU109872 lncRNA upstream 120065 3531586 ~ 3531789 (-) True G96600
CI01000016_03322103_03326683.mRNA mRNA downstream 80477 3322003 ~ 3330762 (-) False CI01000016_03322103_03326683
CI01000016_03082653_03084658.mRNA mRNA downstream 326581 3082386 ~ 3084658 (-) True CI01000016_03082653_03084658
CI01000016_03072793_03080040.mRNA mRNA downstream 331199 3072728 ~ 3080040 (-) True CI01000016_03072793_03080040
CI01000016_03064633_03068201.mRNA mRNA downstream 342147 3064562 ~ 3069092 (-) True CI01000016_03064633_03068201
CI01000016_03062846_03063013.mRNA mRNA downstream 347967 3062846 ~ 3063272 (-) True CI01000016_03062846_03063013
CI01000016_03555967_03558776.mRNA mRNA upstream 143779 3555300 ~ 3559186 (-) True CI01000016_03555967_03558776
CI01000016_03647744_03675574.mRNA mRNA upstream 236132 3647653 ~ 3675585 (-) False CI01000016_03647744_03675574
CI01000016_03719404_03722988.mRNA mRNA upstream 307646 3719167 ~ 3723058 (-) True CI01000016_03719404_03722988
CI01000016_03834829_03843163.mRNA mRNA upstream 422979 3834500 ~ 3843266 (-) True CI01000016_03834829_03843163
CI01000016_03881771_03883341.mRNA mRNA upstream 468972 3880493 ~ 3883466 (-) True CI01000016_03881771_03883341
TU108180 other downstream 425598 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 1134964 2270836 ~ 2276275 (-) True G94786
TU109910 other upstream 224086 3635607 ~ 3665313 (-) True G96628
TU110003 other upstream 454240 3865761 ~ 3890326 (-) True G96690
TU110416 other upstream 1501187 4912708 ~ 4923404 (-) True G97040
TU110385 other upstream 1913998 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 2000738 5415682 ~ 5418217 (-) True G97020

Expression Profile