RNA id: TU110478


Basic Information

Item Value
RNA id TU110478
length 224
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G97098
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4964408 ~ 4964631 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATTAAACCACTTACCCTCGTAGTTACGCAAATAGCTAGATATGTAGAGTTTAAAACCTTTGTCCGCTTGCTTGTTGGGAGCAGGGGACCAGGCATCAATGATGCGATAAACATCGCTGATGCTTATTTTAGGCAAATCCTGGAGACATCAAGTAAAAACAGACATTTTGAGCATCGCGCAAGTAAACCGGAAACCGATATGCCGACTTCTGGCGCCAACGGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110477 lncRNA downstream 764 4962586 ~ 4963644 (-) True G97097
TU110476 lncRNA downstream 4255 4959898 ~ 4960153 (-) True G97096
TU110472 lncRNA downstream 6670 4957517 ~ 4957738 (-) True G97092
TU110471 lncRNA downstream 6964 4957201 ~ 4957444 (-) True G97091
TU110454 lncRNA downstream 86626 4877344 ~ 4877782 (-) True G97074
TU110480 lncRNA upstream 1463 4966094 ~ 4966306 (-) True G97100
TU110481 lncRNA upstream 2371 4967002 ~ 4967302 (-) True G97101
TU110413 lncRNA upstream 4758 4969389 ~ 4970780 (-) True G97037
TU110421 lncRNA upstream 103053 5067684 ~ 5073528 (-) True G97045
TU110521 lncRNA upstream 158449 5123080 ~ 5123476 (-) True G97135
CI01000016_04936283_04939240.mRNA mRNA downstream 25168 4936013 ~ 4939240 (-) True CI01000016_04936283_04939240
CI01000016_04927541_04930989.mRNA mRNA downstream 33419 4926094 ~ 4930989 (-) True CI01000016_04927541_04930989
CI01000016_04921091_04922518.mRNA mRNA downstream 41890 4920868 ~ 4922518 (-) False CI01000016_04921091_04922518
CI01000016_04802496_04812976.mRNA mRNA downstream 151142 4802454 ~ 4813266 (-) True CI01000016_04802496_04812976
CI01000016_04696937_04698098.mRNA mRNA downstream 265790 4696685 ~ 4698618 (-) True CI01000016_04696937_04698098
CI01000016_04971399_04981029.mRNA mRNA upstream 6711 4971342 ~ 4981400 (-) True CI01000016_04971399_04981029
CI01000016_04995532_04996727.mRNA mRNA upstream 30181 4994812 ~ 4996727 (-) True CI01000016_04995532_04996727
CI01000016_05011639_05013290.mRNA mRNA upstream 45142 5009773 ~ 5013290 (-) True CI01000016_05011639_05013290
CI01000016_05037135_05040030.mRNA mRNA upstream 72504 5037135 ~ 5041364 (-) True CI01000016_05037135_05040030
CI01000016_05052905_05056425.mRNA mRNA upstream 87744 5052375 ~ 5056425 (-) True CI01000016_05052905_05056425
TU110416 other downstream 41004 4912708 ~ 4923404 (-) True G97040
TU110003 other downstream 1033357 3865761 ~ 3890326 (-) True G96690
TU109910 other downstream 1299095 3635607 ~ 3665313 (-) True G96628
TU108180 other downstream 1978767 2985260 ~ 2985641 (-) True G95070
TU107853 other downstream 2688133 2270836 ~ 2276275 (-) True G94786
TU110385 other upstream 360888 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110396 other upstream 447628 5415682 ~ 5418217 (-) True G97020
TU110786 other upstream 1194355 6158986 ~ 6159721 (-) True G97341
TU112287 other upstream 3924202 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496
TU112294 other upstream 3972158 8936789 ~ 8936818 (-) True G98677

Expression Profile